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Table 1 Housekeeping genes expressed in 15 tissues

From: Housekeeping and tissue-specific genes in mouse tissues

      Tissues (total tags count sequenced)           
Tag Testis (56909) Prostate (143559) O vary (56154) Mammary gland (40546) Uterus (178824) Vagina (50819) Skin (161093) Liver (170384) Adipose tissue (158218) Lung (159843) Bone (74859) Skeletal muscle (135530) Cerebral cortex (161221) Hypothalamus (165981) Pituitary gland (128480) Regulation by GDX, DHT, ADX or Gcc Description [UniGene cluster, GenBank Accession no.] General function
Housekeeping genes constantly expressed
GCCAAGTGGAG 109 87 216 94 141 203 147 154 184 159 123 146 96 129 111   eukaryotic translation elongation factor 2 [Mm.334671, BB705125] Protein synthesis
GATTCCGTGAG 79 85 186 92 128 191 161 81 106 127 126 85 98 147 88 GDXm ribosomal protein L37 [Mm.10474, AK012544] Protein synthesis
CCTCGGAAAAT 9 10 21 10 21 32 19 11 22 12 25 35 20 25 28   ribosomal protein L38 [Mm.238817, BC055346] Protein synthesis
GTAGCTCACAA 19 15 27 17 22 20 14 17 16 24 25 13 12 17 28   hypothetical protein [Mm.302962, BB767941] Protein secretion
TAACTGGAGGA 30 10 27 10 10 28 19 10 16 28 15 7 22 28 12 GDXp leukocyte receptor cluster (LR C) member 8 [Mm.22831, BC066768] Cell defence
GTGGTGCACAC 19 10 11 10 9 24 11 16 14 18 15 13 15 29 24   RIKEN cDNA C030036P15 gene [Mm.36291, NM_172757] Protein binding
CTCAACAGCAA 5 9 27 15 12 20 17 14 17 14 16 14 16 10 15   eukaryotic translation initiation factor 3, subunit 5 (epsilon) [Mm.182962, NM_025344] Protein synthesis
GGTGATGAGGA 4 9 7 15 9 22 13 12 25 11 15 24 10 19 10   RIKEN cDNA 1500016L11 gene [Mm.295670, NM_026885] Cell division
GGGGCTCTGGC 16 9 20 10 10 12 10 16 16 8 25 21 8 7 6   proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 [Mm.2261, NM_008951] Cell defence
GCCTCAGAGAC 7 5 9 10 10 14 9 5 13 14 7 11 18 19 13   RIKEN cDNA 2410104I19 gene [Mm.29965, NM_133691] translational initiation regulation
Previously postulated housekeeping genes
GAGCGTTTTGG 63 49 130a 84 119a 177a 127a 54 296a 153a 178a 93 238a 226a 61   peptidyl-prolyl cis-trans isomerase A (PPIase) [Mm.342899, XM_122578] Protein synthesis
GCCTCCAAGGA 16 47a 98a 114a 70a 175a 149a 159a 366a 64a 159a 2332a 309a 267a 97a DHTat, u glyceraldehyde-3-phosphate dehydrogenase [Mm.303486, XM_285250] Sugar metabolism
GATACTTGGAA 28a 90a 130a 171a 179a 132a 107a 79a 144a 295a 296a 8 102a 86a 62a   actin, beta, cytoplasmic [Mm.297, BB836462] Cell structure
CCCTGAGTCCA 52a 18 159a 163a 102a 168a 174a 88a 134a 268a 444a 30 100a 86a 31   actin, beta, cytoplasmic [Mm.297, NM_007393] Cell structure
  1. aSignificant difference vs.no.of tags shown in bold (p < 0,05). The tag numbers were normalized by 100000.
  2. Abbreviation: GDX, gonadectomy; DHT, dihydrotestosterone; ADX, adrenalectomy; Gcc, glucocorticoids;m, mammary gland; p, prostate; at, adipose tissue; u,uterus