Table 1 Characteristics of the BESs.
From: Characterization of the genomic region containing the Shadow of Prion Protein (SPRN) gene in sheep
OariBAC clone | Accession number | Length sequence (bp) | Annotation (repeats (class/family) or nucleic acid identity with described sequences) |
|---|---|---|---|
273H7-UP | EI184560 | 650 | No repeats, no homology found |
273H7-RP | EI184569 | 723 | Cow: NM_001076278: 91% Man: AL360181: 91% |
567E3-UP | EI184567 | 752 | 21–173: L1M4 (LINE/L1) 160–752: BovB (LINE/RTE) |
567E3-RP | EI184564 | 824 | 29–823: L1MA4A (LINE/L1) |
265G4-UP | EI184562 | 743 | 114–257: MER34A1 (LTR/ERV1) 318–426: L1MC3 (LINE/L1) 498–688: L1MC3 (LINE1/L1) |
265G4-RP | EI184566 | 454 | 246–278: TGGG(n) (simple repeat) |
182G04-UP | EI184568 | 171 | No repeats, no homology found |
182G04-RP | EI184565 | 391 | Cow: DQ058603: 89% |
161G10-UP | EI184561 | 267 | Cow: DQ058602: 89% |
161G10-RP | EI184563 | 306 | 1–210: BovB (LINE/RTE) |