Table 3 Negatively affected transcription factors in the long-lived mutants. The "num" column indicates the number of target genes of a transcription factor under a specific condition at the 0.01 significance level according to the ChIP-chip data.
From: Inference of transcription modification in long-live yeast strains from their expression profiles
Transcription Factor | Condition | Num | sch9Δ/wt | ras2Δ/wt | tor1Δ/wt | |||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | p-value | q-value | p-value | q-value | p-value | q-value |
ABF1 | YPD | 549 | 1.9E-04 | 0.012 | 6.1E-07 | 9.6E-05 | 1.6E-07 | 3.2E-05 |
GCN4 | RAPA | 324 | 0.77 | 0.90 | 0.031 | 0.26 | 1.3E-09 | 4.2E-07 |
GCN4 | YPD | 143 | 0.16 | 0.43 | 0.0031 | 0.052 | 9.2E-11 | 3.6E-08 |
HAP4 | YPD | 126 | 4.2E-06 | 5.5E-04 | 0.0013 | 0.040 | 1.2E-05 | 0.0011 |
INO2 | YPD | 114 | 1.2E-05 | 0.0011 | 0.0038 | 0.056 | 0.0014 | 0.040 |
RTG3 | RAPA | 158 | 0.0016 | 0.038 | 9.9E-05 | 0.0059 | 1.3E-05 | 0.0010 |