Table 1 List of specific markers mapped to 12 K RH BTA14 map with BLAST hits to multiple chromosomes on Btau_3.1
NCBI Accession number/NCBI SNP id | Marker name | BTA14 RH12,000 position (cR) | NCBI Accession number (scaffold)/BTA | BLAST Score/E-value |
|---|---|---|---|---|
ss61534608 | BTA-34290 | 76.2 | NW_001502201.1|BtUn_WGA3528_3 NW_001493186.1|Bt14_WGA1694_3 | 920 0.0 |
ss69374948 | CC513828-C70T | 313.1 | NW_001497844.1|BtUn_WGA12210_3 NW_001493182.1|Bt14_WGA1690_3 | 279 3e-73 |
ss69374951 | CC517185-A407G | 320.9 | NW_001508604.1|BtUn_WGA9931_3 NW_001493182.1|Bt14_WGA1690_3 | 361 2e-97 |
ss69374954 | CC517185-A286G | 338.7 | NW_001508604.1|BtUn_WGA9931_3 | 366 5e-99 |
ss61535184 | BTA-35317 | 413.3 | NW_001504912.1|BtUn_WGA6239_3 | 920 0.0 |
ss69374970 | BZ879040-A200G | 725.9 | NW_001508460.1|BtUn_WGA9787_3 NW_001493193.1|Bt14_WGA1701_3 | 366 5e-99 |
ss61473730 | BTA-114222 | 938.9 | NW_001493195.1|Bt14_WGA1703_3 NW_001495461.1|Bt8_WGA1109_3 | 894 0.0 |
ss38334682 | BTA-12630 | 1705.8 | NW_001493441.1|Bt16_WGA1949_3 NW_001493205.1|Bt14_WGA1713_3 | 920 0.0 |
ss61480494 | BTA-34395 | 1847.2 | NW_001503381.1|BtUn_WGA4708_3 | 754 0.0 |
ss61480492 | BTA-34393 | 1847.2 | NW_001503381.1|BtUn_WGA4708_3 | 769 0.0 |
ss61508240 | BTA-34679 | 2593.8 | NW_001493216.1|Bt14_WGA1724_3 NW_001505586.1|BtUn_WGA6913_3 | 920 0.0 |
ss61508239 | BTA-34678 | 2593.8 | NW_001493216.1|Bt14_WGA1724_3 NW_001505586.1|BtUn_WGA6913_3 | 920 0.0 915 0.0 |
ss61508238 | BTA-34677 | 2593.8 | NW_001505586.1|BtUn_WGA6913_3 NW_001493216.1|Bt14_WGA1724_3 | 920 0.0 |
ss61508235 | BTA-34674 | 2606.1 | NW_001505586.1|BtUn_WGA6913_3 NW_001493216.1|Bt14_WGA1724_3 | 887 0.0 |
ss61475994 | BTA-16955 | 2767.3 | NW_001497831.1|BtUn_WGA12197_3 NW_001493220.1|Bt14_WGA1728_3 | 915 0.0 |
ss61485958 | BTA-55549 | 3011.7 | NW_001494573.1|Bt2_WGA221_3 NW_001493224.1|Bt14_WGA1732_3 | 920 0.0 898 0.0 |
ss38337066 | BTA-15014 | 3271.8 | NW_001502681.1|BtUn_WGA4008_3 | 915 0.0 |
ss61564952 | BTA-90430 | 3343.8 | NW_001507724.1|BtUn_WGA9051_3 NW_001493239.1|Bt14_WGA1747_3 | 512 6e-143 |
ss61547746 | BTA-58540 | 3401.2 | NW_001494258.1|Bt24_WGA2566_3 NW_001493238.1|Bt14_WGA1746_3 | 869 0.0 867 0.0 |
ss61467380 | BTA-35166 | 3679.4 | NW_001493243.1|Bt14_WGA1751_3 NW_001493244.1|Bt14_WGA1752_3 | 920 0.0 |