Table 6 Search the pre-miRNAs in human chromosome 21
From: RScan: fast searching structural similarities for structured RNAs in large databases
Query | Database | k = 9 | k = 11 | ||
|---|---|---|---|---|---|
| Â | Â | Hits/Known1 | Tsearch (s) | Hits/Known | Tsearch (s) |
hsa-mir-99a | 150 nt chr21 structural database | 24/1 | 234 | 3/1 | 71 |
hsa-let-7c | Â | 6/1 | 151 | 2/1 | 49 |
hsa-mir-125b-2 | Â | 12/1 | 139 | 3/1 | 38 |
hsa-mir-155 | Â | 14/1 | 228 | 4/1 | 66 |