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Table 4 Coverage of 8-way MCS-SNPs in whole-genome assay sets

From: SNPs in Multi-Species Conserved Sequences (MCS) as useful markers in association studies: a practical approach

 

Chr1: 233,515,650-240,494,277

Chr8: 95,000,001–100,000,000

Total MCS-SNPs

906

382

 

within MCS:

Affymetrix 500 K Nsp SNPs

31 (3.4%)

29 (7.6%)

Affymetrix 500 K Sty SNPs

21 (2.3%)

14 (3.7%)

Total Affy500 K

52 (5.7%)

43 (11.7%)

Illumina 300 K

39 (4.3%)

32 (8.4%)

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BMC Genomics

ISSN: 1471-2164

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