Biological Process | No. in Genome | % in Genome | 2 hr N increase | 24 hr N increase | ||||
---|---|---|---|---|---|---|---|---|
 |  |  | No. in List | % in List | P-value | No. in List | % in List | P-value |
Up-regulated | Â | Â | Â | Â | Â | Â | Â | Â |
transport | 1398 | 7.7 | 11 | 20.4 | 0.002 | Â | Â | Â |
cell homeostasis | 64 | 0.4 | 3 | 5.6 | 0.0009 | Â | Â | Â |
nitrate assimilation | 7 | 0.04 | 2 | 3.7 | 0.0002 | Â | Â | Â |
sulfate assimilation | 11 | 0.06 | 2 | 3.7 | 0.0005 | Â | Â | Â |
response to carbohydrate stimulus | 29 | 0.16 | 2 | 3.7 | 0.003 | Â | Â | Â |
primary metabolism | 5170 | 28.5 | Â | Â | Â | 203 | 54.7 | 1.0E-26 |
protein biosynthesis | 500 | 2.8 | Â | Â | Â | 121 | 32.6 | 4.2E-98 |
organelle organization and biogenesis | 439 | 2.4 | Â | Â | Â | 45 | 12.1 | 3.5E-19 |
ribosome biogenesis and assembly | 117 | 0.6 | Â | Â | Â | 34 | 9.2 | 5.9E-30 |
translation | 136 | 0.7 | Â | Â | Â | 13 | 3.5 | 4.4E-06 |
response to auxin stimulus | 191 | 1.1 | Â | Â | Â | 12 | 3.2 | 0.0006 |
nucleosome assembly | 56 | 0.3 | Â | Â | Â | 9 | 2.4 | 1.8E-06 |
DNA packaging | 106 | 0.6 | Â | Â | Â | 9 | 2.4 | 0.0003 |
translational elongation | 31 | 0.2 | Â | Â | Â | 8 | 2.2 | 1.5E-07 |
nitrogen compound metabolism | 124 | 0.7 | Â | Â | Â | 8 | 2.2 | 0.004 |
amino acid biosynthesis | 99 | 0.5 | Â | Â | Â | 7 | 1.9 | 0.004 |
ribonucleotide biosynthesis | 45 | 0.2 | Â | Â | Â | 5 | 1.3 | 0.002 |
chlorophyll biosynthesis | 14 | 0.08 | Â | Â | Â | 4 | 1.1 | 0.0001 |
response to cytokinin stimulus | 31 | 0.2 | 3 | 5.6 | 0.0001 | 4 | 1.1 | 0.003 |
Down-regulated | Â | Â | Â | Â | Â | Â | Â | Â |
response to abiotic stimulus | 1091 | 6.0 | Â | Â | Â | 40 | 15.5 | 3.2E-08 |
secondary metabolism | 249 | 1.4 | Â | Â | Â | 14 | 5.4 | 1.4E-05 |
response to abscisic acid stimulus | 113 | 0.6 | Â | Â | Â | 11 | 4.3 | 6.3E-07 |
phenylpropanoid biosynthesis | 79 | 0.4 | Â | Â | Â | 7 | 2.7 | 0.0001 |
flavonoid biosynthesis | 30 | 0.2 | Â | Â | Â | 5 | 1.9 | 6.0E-05 |
anthocyanin biosynthesis | 8 | 0.04 | 1 | 10 | 0.004 | 3 | 1.2 | 0.0002 |
starch biosynthesis | 7 | 0.04 | Â | Â | Â | 2 | 0.8 | 0.004 |