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Table 3 List of transcripts that were consensually differentially expressed amongst the tolerant and susceptible genotypes for each stress, tissue type and time-point

From: Transcriptional profiling of chickpea genes differentially regulated in response to high-salinity, cold and drought

GenBank Accession Putative function Log2 ratio P value
   Group I* Group II* Group I* Group II*
Drought susceptible flowers
DY475548 Cytosolic fructose 1,6-bisphosphatase -1.7 -1.02 4.81E-43 7.33E-13
DY475051 Unknown -1.47 -5.24 1.29E-11 7.45E-40
Cold tolerant leaves
DY475555 Chlorophyll a/b binding protein -1 -1.89 7.65E-12 1.90E-03
EB085047 18S rRNA -1.25 -1.15 8.04E-05 1.01E-05
DY396262 Probable Ca-binding mitochondrial carrier -1.1 -1.6 2.82E-11 3.97E-03
DY475384 Serine/threonine protein kinase -2.43 -3.27 1.19E-18 1.33E-08
DY475141 Beta-galactosidase -2 -1.63 1.35E-05 2.98E-04
DY396371 Polyubiquitin -1.05 -1.62 2.62E-08 7.42E-04
DY475282 Trehalose-phosphatase -1.27 -1.82 2.94E-04 3.49E-05
DY396343 Pathogenesis-related protein -1.46 -1.69 1.05E-11 3.27E-06
DY396307 Serine/threonine protein kinase -1.12 -1.14 1.93E-18 4.64E-03
DY475323 Unclear -1.42 -2.05 2.53E-05 2.84E-28
DY475203 Unknown -1.51 -1.6 4.58E-04 3.91E-05
Cold susceptible leaves
DY475523 Sorting nexin protein -2.1 -1.12 6.18E-05 8.43E-05
DY475329 Unclear -1.7 -1.07 1.92E-05 8.39E-03
DY475431 Unknown -1.54 -1.63 8.43E-03 3.79E-06
Cold susceptible flowers
DY475397 Superoxide dismutase copper chaperone precursor -4.16 -1.47 9.50E-07 7.69E-09
High-salinity tolerant shoot 24 hpt
DY475501 P700 chlorophyll a-apoprotein -1.06 -2.13 1.06E-03 1.13E-06
DY475287 NADH-plastoquinone oxidoreductase subunit I -3.55 -2.41 3.75E-04 1.53E-04
DY475215 Unknown -2.14 -1.52 3.97E-07 2.61E-06
High-salinity tolerant root 24 hpt
EB085052 Unknown -1.46 -1.64 3.69E-07 1.78E-08
DY396290 Splicing factor-like protein -1.7 -1.31 1.75E-03 1.22E-02
DY396300 ATHP3 (histidine-containing phosphotransfer protein) -1.3 -1.21 3.40E-06 1.24E-10
DY396342 Glycine-rich cell wall protein GRP 1.8 -1.43 -2.77 3.51E-03 4.01E-04
DY475077 Protein kinase -1.37 -2.91 2.31E-07 2.13E-06
DY475548 Cytosolic fructose 1,6-bisphosphatase -2.36 -1.22 2.10E-03 5.54E-04
DY475124 Aquaporin -1.73 -1 9.28E-13 1.57E-13
DY475256 Unknown -1.07 -1.15 1.77E-05 1.31E-02
DY475275 Unknown -1.93 -1.27 2.68E-10 3.50E-05
DY475293 Unknown 1.23 1.4 4.70E-06 8.35E-11
DY475347 Unknown -5.82 -2.72 2.49E-03 1.58E-19
DY475416 Unknown -1.94 -1.67 9.14E-03 3.24E-04
High-salinity susceptible root 24 hpt
DY475225 Proline oxidase -1.19 -2.64 5.03E-04 1.08E-08
DY475186 Unclear -2.3 -1.56 4.35E-09 1.36E-08
High-salinity tolerant shoot 48 hpt
DY396301 Pathogenesis-related protein -3.26 -1.73 2.87E-08 3.30E-07
High-salinity susceptible shoot 48 hpt
DY475205 Unclear 2.49 1.45 2.18E-16 1.63E-04
DY475048 Unknown -2.7 -1.76 6.97E-03 3.47E-03
High-salinity tolerant root 48 hpt
DY396262 Probable Ca-binding mitochondrial carrier -1.18 -1.26 9.17E-15 7.88E-03
DY475403 Carbonic anhydrase -1.47 -2.36 5.46E-07 2.28E-09
DY475242 Thiazole biosynthetic enzyme -1.77 -2.48 4.38E-06 9.27E-06
DY396281 Pathogenesis-related protein 4A 3.35 2.6 2.81E-17 3.49E-14
DY475416 Unknown -3.71 -2.25 4.30E-06 1.80E-08
DY475521 Unknown 1.38 1.01 3.68E-09 6.70E-07
High-salinity susceptible root 48 hpt
DY396290 Splicing factor-like protein -2.63 -1.65 4.68E-08 1.97E-04
DY475408 Xylosidase 2.48 1.09 9.41E-04 4.53E-03
DY475217 Unclear -2.03 -1.02 1.39E-04 7.44E-03
DY475390 Unknown 2.19 1.05 2.65E-04 1.56E-03
  1. * The tolerant/susceptible genotypes used in Group I and Group II are mentioned in Table 4.