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Table 1 Primers used to detect equine polymorphisms

From: Characterization of the equine 2'-5' oligoadenylate synthetase 1 (OAS1) and ribonuclease L (RNASEL) innate immunity genes

Gene

Region

Forward Primer

Reverse Primer

OAS1

Promoter

AACCCACAGAATAAACACCACA

GTCGATGGCTTCTCGGAC

 

Exon 1

CCAGACTCAGGCAACGTAAG

GTTTTGCTCTCTCCCTTCCT

 

Exon 2

GTGATTGTTGTCTGGTGATGG

AAACTGTGGGAGATTTCTGCT

 

Exon 3

GTAACTTGGTTGTGTCCGTGG

AGACTGGATGGAGGGCCATA

 

Exon 4

AGCGTGAAAACCACCACAGA

TCCCACATCCTCCATTTCC

 

Exon 5

CACTGGGCTGGTCCTCCT

CCTCCAAACGGGGTCAAA

 

Exon 6

GCAGGTGGCACGTCACAG

GGCACTGTGCCCTGAAGTTAA

RNASEL

Exon 1

CATCTCCCTTCTCCGTCCTCG

TGCAATGGATGAGTCCTGGT

 

Exon 2

CAAAGTACTTCTCTCATCCCCAG

TCCGAAGAGCATGGAACAAA

 

Exon 2

AAGATCCTCCTTGATGAGATGG

GGCCTTTCCTATCTGCAATG

 

Exon 3

AAATGTAAGTCCTGCTCTTGGC

CAAGCAACTCCACACCAACC

 

Exon 4

CTCGTAGCCTGCACCACAC

CACGGTAGATCGCGGAACTT

 

Exon 5

CCATGTTAATTCTCTCATCTTCAG

TCTCTCACCTCTTGGTAGGGC

 

Exon 6

GCTCCTACATTTTTGCGTAATG

GTTCTTCCCATCAAATAGCAGA

 

Exon 7

ATCTCTGGAACCGGGTGCT

CACTACCAAATGGCCCTGAG

 

Exon 7

CTCTGGGTGGCTCATTCATT

TCCCAGCTCTTCCCATTACA

  1. Forward and reverse primers for amplification of the OAS1 promoter and individual exons of equine OAS1 and RNASEL.