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Table 7 Differentially expressed genes of the proteolysis

From: Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss)

Symbol

Gene name

ACC.#

p value

GO Term

Fold change

Psmc6

Proteasome (prosome, macropain) 26S subunit, ATPase, 6

CB518083

4.3E-02

protein catabolism – GO:0030163

-2.3

PSME2

Proteasome (prosome, macropain) activator subunit 2

CB491442

1.5E-02

protein catabolism – GO:0030163

-5.7

Ubc

Ubiquitin C

CA048031

9.6E-04

ubiquitin-dependent protein catabolism-GO:0006511

-2.8

UCHL5

Ubiquitin carboxyl-terminal hydrolase L5

CA053740

1.2E-02

ubiquitin-dependent protein catabolism-GO:0006511

-7.1

UBE1C

Ubiquitin-activating enzyme E1C (UBA3 homolog, yeast)

CA051243

4.6E-02

proteolysis – GO:0006508

-2.3

Ubb

Polyubiquitin

CB500037

6.5E-04

protein ubiquitination – GO:0016567 :

-4.4

FBXO38

F-box protein 38

CB509947

4.2E-04

ubiquitin cycle – GO:0006512

-7.0

RBX1

Ring-box 1

CA062272

8.6E-03

protein ubiquitination – GO:0016567

-3.8

TRIM39

Tripartite motif-containing 39

CB514566

2.6E-02

protein ubiquitination – GO:0016567

-2.0

PITRM1

Pitrilysin metallopeptidase 1

CA050901

7.5E-03

metalloendopeptidase activity-GO:0004222

-3.2

TIMP2

TIMP metallopeptidase inhibitor 2

CB492841

2.0E-02

enzyme inhibitor activity – GO:0004857

-4.0

ACY1

Aminoacylase 1

CA054045

2.1E-02

amino acid metabolism – GO:0006520

-2.1

ITIH5

Inter-alpha (globulin) inhibitor H5

CA039272

3.6E-02

hyaluronan metabolism – GO:0030212

-2.8

Itih3

Inter-alpha trypsin inhibitor, heavy chain 3

CA037372

1.8E-02

hyaluronan metabolism – GO:0030212

-2.8

NUPR1

P8 protein (candidate of metastasis 1)

CA043387

1.0E-02

induction of apoptosis – GO:0006917

-2.9

SQSTM1

Sequestosome 1

CB492474

1.8E-04

apoptosis – GO:0006915

-5.9

CASP10

Caspase 10, apoptosis-related cysteine peptidase

CB498395

7.4E-03

induction of apoptosis – GO:0006917

-3.0

PDCD6

Programmed cell death 6

CB514639

1.1E-03

apoptosis – GO:0006915

3.1

Rilp

Rab interacting lysosomal protein

CB517236

2.2E-02

transport – GO:0006810

-2.6

Edem1

ER degradation enhancer, mannosidase alpha-like 1

CA063288

3.4E-02

response to unfolded protein-GO:0006986

2.3