From: Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing
 |  |  |  |  |  |  |  | Ratioe of |  |  |  |
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BAC | Linkage group | Genbank accession | SNP IDb | Length (bp) | Phase | Gap | ORFsc | Averaged EST coverage | EST- based coverage | Overall gene homeologyf | Gene densityg |
gmw2-133d1 | F | AC158503 | 8001 | 117591 | III | 0 | 13 | 32.6 | 38.2 | 3 of 13 | 1/9.05 |
gmw1-93l19 | M | AC166092 | Â | 51037 | III | 0 | 5 | 62.4 | 50.5 | 3 of 5 | 1/10.2 |
gmw1-105h23 | O | AC187294 | 30491 | 134287 | III | 0 | 18 | 82.0 | 76.4 | 18 of 18 | 1/7.46 |
gmw1-15k6 | I | AC160454 | 26051 | 148858 | III | 0 | 22 | 77.0 | 71.1 | 18 of 22 | 1/6.77 |
gmw1-11j16 | L | AC166091 | Â | 69947 | III | 0 | 9 | 82.2 | 83.0 | 2 of 9 | 1/7.77 |
gmw1-45m6 | a | AC166742 | Â | 143028 | III | 0 | 7 | 53.6 | 53.0 | 1 of 7 | 1/20.4 |
gmw1-5g16 | O | AC169184 | Â | 115953 | II | 2 | 11 | 74.0 | 68.8 | 4 of 11 | 1/9.66 |
gmw1-103e11 | I | AC166090 | Â | 89397 | III | 0 | 12 | 78.6 | 81.3 | 4 of 12 | 1/7.45 |
gmw1-58k3 | O | AC185959 | Â | 177331 | II | 2 | 8 | 50.7 | 47.5 | 3 of 8 | 1/22.2 |
gmw1-57d24 | D1a | AC170860 | 20113 | 162359 | II | 2 | 19 | 75.0 | 71.5 | 3 of 19 | 1/9.02 |
gmw1-27d20 | D1b | AC173959 | 16079 | 227022 | I | 6 | 24 | 65.4 | 61.9 | 3 of 24 | 1/9.46 |
gmw1-74i13 | C1 | DQ336954 | 5981 | 173654 | III | 0 | 18 | 68.3 | 70.4 | 13 of 18 | 1/9.65 |
gmw1-52d3 | C2 | DQ336955 | Â | 98675 | III | 0 | 10 | 59.2 | 62.1 | 9 of 10 | 1/9.87 |
gmw1-13o17 | D1a | AC196857 | Â | 89030 | II | 5 | 9 | 41.5 | 48.0 | 1 of 9 | 1/11.1 |
gmw1-8g7 | a | AC196858 | Â | 53292 | III | 0 | 4 | 32.6 | 30.7 | 1 of 4 | 1/13.3 |
UMb001-24d13 | E | DQ347960 | 13567 | 111223 | II | 1 | 8 | 84.0 | 79.3 | 3 of 8 | 1/13.9 |
UMb001-5f5 | A2 | DQ347961 | 42937 | 65475 | II | 2 | 5 | 91.9 | 94.6 | 3 of 5 | 1/10.9 |
Average | Â | Â | Â | 119303 | Â | Â | 14 | 59.1 | 59.05 | Â | 1/11.1 |