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Table 2 List of contigs with best E-values obtained for the BR-BW library sequences

From: Identification of proteins involved in the functioning of Riftia pachyptila symbiosis by Subtractive Suppression Hybridization

Contig (BRbwC)

Number of sequences per contig

Putative identification on Blastx

E-value

GenBank accession number*

Mitochondrial sequences

1

78

rRNA 16S large subunit 2390–2967

0

AY741662.1

2

32

rRNA 16S large subunit 2962–3499

0

AY741662.1

3

7

cytochrome c oxidase (ccox) subunit I 12–729

0

AAU20751.1

4

2

ccox subunit I 735–1548

0

AAU20751.1

5

1

ccox subunit Vb

0.084

EF648457

6

1

ccox subunit VIc

6.10-13

EF648477

7

1

ccox Proteus vulgaris

0.19

EF648458

8

2

ccox subunit Va

4.10-28

EF648459

9

1

ccox subunit Vb

0.11

EF648460

All processes sequences (E-value<1)

10

2

ATP F0 c subunit

3.10-16

EF648461

11

1

ATP F1 β subunit

4.10-93

EF648462

12

11

carbonic anhydrase

3.10-12

EF490380

13

4

Major Vault Protein

6.10-20

EF648463

14

1

chitinase precursor

3.10-8

EF648464

15

3

cathepsine L-like

0.004

EF648465

16

2

BTG1 protein

2.10-21

EF648466

17

1

α-tubuline

3.10-5

EF648467

18

1

hydroxylamine reductase

3.10-20

EF648468

19

1

transcription repair coupling factor

0.67

EF648469

20

1

transcriptional regulator

0.66

EF648470

21

1

valosin containing protein

0.013

EF648471

22

1

Rab5 GDP/GTP exchange factor

0.65

EF648472

23

1

serine protease

0.56

EF648473

Hypothetical protein (E-value<1)

24

1

super cystein-rich protein

5.10-8

EF648474

25

1

hypothetical protein

2.10-22

EF648475

26

1

hypothetical protein

2.10-5

EF648476

Unknown sequences (E-value>1 or No Hits Found)

27 to 58

GenBank accession numbers EF648478 to EF648509