Table 2 Overview of the DNA copy number changes in 10 pyloric gland adenomas
From: DNA copy number profiles of gastric cancer precursor lesions
Chromosomal aberrations | Flanking clones | ||||
|---|---|---|---|---|---|
Tumour ID | Gains | Losses | Segment size (Mb) | Start | End |
12 | 1q21.3-q23.3 | 9.95 | RP11-98D18 | RP11-5K23 | |
1q42.13-q43 | 14.07 | RP11-375H24 | RP11-80B9 | ||
3q | 111.59 | RP11-312H1 | RP11-23M2 | ||
5q35.1-q35.3 | 9.11 | RP11-20O22 | RP11-451H23 | ||
6q | 115.76 | RP11-524H19 | RP5-1086L22 | ||
7 | 156.09 | RP11-510K8 | RP11-518I12 | ||
17 | 77.48 | RP11-4F24 | RP11-313F15 | ||
20 | 63.47 | CTB-106I1 | CTB-81F12 | ||
13 | - | - | |||
14 | 4 | 191.13 | CTC-963K6 | RP11-45F23 | |
5q | 128.59 | CTD-2276O24 | RP11-281O15 | ||
14q | 83.81 | RP11-98N22 | RP11-73M18 | ||
16 | 89.71 | RP11-344L6 | RP4-597G12 | ||
20q13.2-q13.33 | 10.84 | RP4-724E16 | CTB-81F12 | ||
15 | 9q33.2-q34.3 | 16.81 | RP11-57K1 | RP11-83N9 | |
11q23.2-q24.3 | 16.04 | RP11-635F12 | RP11-567M21 | ||
12q14.3-q15 | 2.58 | RP11-30I11 | RP11-444B24 | ||
20q13.31-q13.33 | 6.86 | RP5-1153D9 | RP5-963E22 | ||
22q | 32.53 | XX-p8708 | CTA-722E9 | ||
16 | 9q33.3-qter | 13.57 | RP11-85C21 | GS1-135I17 | |
10p12.1-qter | 110.28 | RP11-379L21 | RP11-45A17 | ||
11q23.1-q24.3 | 17.72 | RP11-107P10 | RP11-567M21 | ||
13q31.1-q32.1 | 10.84 | RP11-661D17 | RP11-40H10 | ||
20q13.2-q13.31 | 1.96 | RP11-55E1 | RP4-586J11 | ||
17 | 1p34.3-pter | 35.59 | RP1-37J18 | RP11-204L3 | |
1p33-qter | 203.62 | RP4-739H11 | RP11-551G24 | ||
2q31.1-qter | 66.00 | RP11-205B19 | RP11-556H17 | ||
5q21.1-q31.2 | 40.27 | CTD-2068C11 | RP11-515C16 | ||
5q31.3-qter | 39.06 | CTD-2323H12 | RP11-451H23 | ||
6q | 113.61 | RP11-89D6 | CTB-57H24 | ||
10 | 134.52 | RP11-10D13 | RP11-122K13 | ||
13q31.1-qter | 36.14 | RP11-388E20 | RP11-245B11 | ||
20q13.2-qter | 11.24 | RP11-15M15 | RP5-1022E24 | ||
18 | 5q11.2-q21.2 | 51.24 | CTC-1329H14 | RP1-66P19 | |
6p12.1-q16.3 | 51.24 | RP11-7H16 | RP11-438N24 | ||
9pter-q13 | 66.82 | GS1-41L13 | RP11-265B8 | ||
10 | 133.04 | RP11-10D13 | RP11-45A17 | ||
13q21.1-q21.33 | 18.39 | RP11-240M20 | RP11-335N6 | ||
13q31.1-q31.3 | 12.45 | RP11-551D9 | RP11-100A3 | ||
21cen-q21.3 | 17.39 | RP11-193B6 | RP11-41N19 | ||
19 | 1p32.3-p21.1 | 50.40 | RP11-117D22 | RP5-1108M17 | |
5q11.2-q13.3 | 24.64 | RP4-592P18 | CTD-2200O3 | ||
13q12.11-q14.3 | 31.58 | RP11-187L3 | RP11-327P2 | ||
15q12-q26.3 | 77.21 | RP11-131I21 | CTB-154P1 | ||
18q21.1-q23 | 31.31 | RP11-46D1 | RP11-154H12 | ||
22q13.2-qter | 10.02 | CTA-229A8 | CTA-799F10 | ||
20 | 9p-q13 | 66.57 | GS1-41L13 | RP11-274B18 | |
12q13.2-q21.1 (amplification) | 19.50 | RP11-548L8 | RP11-255I14 | ||
12q21.2-qter | 55.56 | RP11-25J3 | RP11-1K22 | ||
18q21.31-q23 | 23.28 | RP11-383D22 | CTC-964M9 | ||
20q13.13-q13.33 (amplification) | 14.62 | RP5-1041C10 | RP5-1022E24 | ||
21 | 5p | 43.15 | CTD-2265D9 | RP11-28I9 | |
5q | 130.26 | RP11-269M20 | RP11-451H23 | ||
6p | 62.57 | CTB-62I11 | RP11-506N21 | ||
6q | 106.73 | RP11-767J14 | RP5-1086L22 |