Table 1 Motifs overrepresented in CNSs over non-CNSs
From: Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
Odd Chromosomes | Even Chromosomes | ||||
|---|---|---|---|---|---|
Motif | Number of occurrences | Overrepre-sentation | Motif | Number of occurrences | Overrepresen-tation |
SYTAATTA | 10620 | 3.45 | TTAATTAV | 12637 | 3.72 |
CTRATTAS | 6152 | 3.14 | TAATTRCW | 12019 | 3.43 |
WGYAATTA | 12596 | 3.09 | GYAATTAS | 6142 | 3.39 |
TTAATTAV | 13141 | 3.08 | TTTAATBA | 15060 | 3.14 |
STAATTGV | 8267 | 2.89 | ATTAATBA | 10910 | 3.07 |
VWGCTAAT | 10503 | 2.84 | TAATTWGM | 10885 | 3.04 |
TTTAATBA | 15800 | 2.77 | GMWTAATT | 9941 | 2.97 |
GMWTAATT | 10290 | 2.72 | CWTAATKA | 10028 | 2.94 |
TAATTATV | 10100 | 2.72 | ATTAAWTT | 11570 | 2.85 |
STTAATKG | 5905 | 2.71 | TTAATBAT | 10115 | 2.79 |
ATTVAATT | 12177 | 2.68 | CWKTAATT | 13079 | 2.75 |
ATTAATBA | 11006 | 2.61 | VWGCTAAT | 9823 | 2.71 |
CWKTAATT | 13577 | 2.59 | CMATWAAT | 10129 | 2.65 |
ATAATTAV | 10536 | 2.58 | ATTTVATT | 15715 | 2.64 |
SMAATTAA | 12754 | 2.57 | CAATTRCH | 8188 | 2.61 |
SBTAATGA | 8828 | 2.56 | MCWAATTA | 9605 | 2.61 |
VATTWGCA | 14265 | 2.53 | ATTWWGCA | 9959 | 2.61 |
TWAATCAR | 10639 | 2.52 | GKTAATTW | 9019 | 2.59 |
AATTAVTT | 12668 | 2.51 | AATTAMCW | 10053 | 2.58 |
GTAATTMM | 7484 | 2.49 | MATTDGCA | 13694 | 2.58 |