Table 2 Motifs overrepresented in CNSs over near-promoter sequences
From: Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
Odd Chromosomes | Even Chromosomes | ||||
|---|---|---|---|---|---|
Motif | Number of occurrences | Overrepre- sentation | Motif | Number of occurrences | Overrepresen-tation |
STAATTAS | 7576 | 4.55 | SYTAATTA | 9852 | 4.26 |
TTAATKAR | 17516 | 4.33 | TTAATTAD | 14561 | 4.07 |
GBTAATKA | 12299 | 3.96 | CTRATTAS | 5744 | 3.90 |
VTAATTGM | 10174 | 3.91 | ATTAATGN | 9762 | 3.74 |
TTTMATKA | 19449 | 3.86 | TAATTATD | 11760 | 3.73 |
MTTMATTA | 13688 | 3.82 | TTTAATDA | 16633 | 3.66 |
AATKYAAT | 15204 | 3.73 | ATAATTAB | 9233 | 3.62 |
TTAATKGV | 12925 | 3.72 | TAATKSAA | 10418 | 3.59 |
RTAATKAA | 13613 | 3.68 | STAATTGV | 7823 | 3.55 |
MMTAATTA | 12518 | 3.68 | GYAATWAA | 10608 | 3.55 |
TSTAATTW | 14964 | 3.49 | TGYAATTW | 13322 | 3.51 |
AATKMATT | 18824 | 3.48 | AATGMWTT | 15412 | 3.49 |
TGATWAAW | 12898 | 3.46 | AGYAATTW | 12585 | 3.41 |
KATAATKA | 10739 | 3.46 | AATTDATT | 14693 | 3.39 |
CATTAAKV | 10838 | 3.42 | AATTATAD | 10379 | 3.36 |
CATWAWTT | 14599 | 3.39 | TWAATTGR | 8896 | 3.35 |
CATTWAAW | 19325 | 3.37 | AWTARCAT | 9601 | 3.35 |
CAATTAKV | 9515 | 3.33 | TAATTHAT | 12789 | 3.34 |
ATRATTYA | 13356 | 3.30 | CWTTAATR | 9114 | 3.32 |
ATTTYMAT | 20983 | 3.29 | ATTSMATT | 11547 | 3.27 |