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Table 3 Linear effects of CARD15 on EBVs for milk yield (Milk), fat yield (Fat), protein yield (Prot), udder depth (UD) and somatic cell score (SCS), when comparing haplotypes Hap11, Hap22, and Hap21, against Hap12.

From: Identification of single nucleotide polymorphisms in bovine CARD15 and their associations with health and production traits in Canadian Holsteins

  Trait
  Milk (Kg) Fat (Kg) Prot (Kg) UD SCS
Haplotypes Haplotype effects ± SE (P level)
Hap11(AA) -325.2 ± 175.30 -8.23 ± 5.60 -12.68 ± 5.20 -0.91 ± 1.00 0.02 ± 0.06
  (0.06) (0.14) (0.01) (0.36) (0.74)
Hap22(TC) 523.5 ± 129.70 6.89 ± 4.15 13.15 ± 3.85 -1.71 ± 0.74 0.05 ± 0.05
  (<0.0001++) (0.07) (0.0007++) (0.02) (0.26)
Hap21(TA) -57.5 ± 81.62 -7.27 ± 2.61 -3.10 ± 2.42 -0.93 ± 0.46 0.07 ± 0.03
  (0.48) (0.0057++) (0.20) (0.04) (0.012+)
Power 1 0.91 0.69 0.90 0.49 0.38
  1. ++Significant effect by permutation test at an experimental-wise significance level of 5%
  2. +Significant effect by permutation test at an experimental-wise significance level of 8%
  3. 1Power of the analysis considering an experimental-wise significance level of either 5% (for Milk, Fat and Prot) or 8% (for UD and SCS).
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