Table 1 Secreted modular calcium binding protein-1 from different species and their homology status with that of water buffalo Bubalus bubalis. The detailed information on Smoc-1 including accession numbers, gene length, exon numbers and chromosomal location are given.
S.N. | Species | Accession numbers (Ensembl/NCBI) | Transcript length | Full length gene (In Kb) | No. of exons | Amino acid residues | Chromo-somal location | Homology with buffalo Smoc-1 | ||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | Â | Â | CDS | Amino acids | Secondary structure |
1. | Bubalus bubalis | DQ159955 | 3274 | NA | 12 | 435 | 11 | 100% | 100% | 100% |
2. | Homo sapiens | ENSG0000198732/AJ249900 | 3666 | 172.94 | 12 | 434 | 14q24.2 | 91% | 95% | 93% |
3. | Pan traglodytes | ENSPTRT0000011881/XM_510036 | 3,669 | 154.09 | 14 | 435 | 14 | 90% | 94% | 94% |
4. | Bos taurus | XM_612029 | 3473 | NA | NA | 434 | 10 | 98% | 98% | 97% |
5. | Mus musculus | ENSMUSG0000021136/NM_022316 | 3472 | 179.58 | 13 | 463 | 12d3 | 84% | 93% | 89% |
6. | Rattus norvegicus | ENSRNOG00000005998/NM_0102835 | 1359 | 193.42 | 12 | 452 | 6q24 | 85% | 92% | 89% |
7. | Canis familiaris | ENSCAFT0000026288 | 1452 | 152.3 | 12 | 459 | 8 | 87% | 95% | 85% |
8. | Gallus gallus | ENSGALG00000009415 | 1404 | 98.76 | 12 | 468 | 5 | 78% | 84% | 83% |