Table 2 X-chromosome CNVRs detected in patients and controls using the X-chromosome tiling path BAC array.
Region | Controls (20) | Cases (54) | Start | Clone | End | Clone | Size kb | Gain/Loss | OMIM Genes within CNVs |
|---|---|---|---|---|---|---|---|---|---|
Xp22.33 | - | 1 | 2497952 | RP11-325D5 | 2773932 | RP11-457M7 | 278 | Gain | CD99, XG, GYG2 |
Xp22.31 | 1 | - | 9304013 | RP11-951B16 | 9510840 | RP11-29K8 | 207 | Gain | TBL1X |
Xp21.2 | 1 | - | 30597301 | RP11-710J8 | 30681589 | RP11-642K22 | 84 | Loss | TAB3 |
Xp11.23 | - | 1/1 | 47732169 | RP11-423H3 | 47806532 | RP11-38O23 | 74 | Loss/Gain | SSX5, SSX6, LOC389852 |
Xq26.3 | -/1 | 3/4 | 134591734 | CTD-2225C20 | 134733742 | RP11-111C16 | 142 | Loss/Gain | SAGE1, MGC88118, MGC27005 |
Xq28* | 1/- | 7/7 | 152963046 | CTD-2149G5 | 153072850 | RP11-330B2 | 110-315 | Loss/Gain | OPN1LW, OPN1MW |
Xq28 | 1 | - | 151551673 | RP11-793M20 | 151886266 | CTD-2515E20 | 335 | Loss | MAGEA6, MAGEA12, MAGEA2B, MAGEA2, MAGEA2B, CSAG2, MAGEA3 |