| Coding region | Non-coding region | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Polymorphic sites | Nucleotide diversity | Polymorphic sites | Nucleotide diversity | |||||||||||||||||||
 | Transition | Transversion |  | |||||||||||||||||||
Gene | nHap | L (bp) | 1st | 2nd | 3rd | Σ | 1st | 2nd | 3rd | Σ | Syn | Rep | Σ | π | πn | Ks | Ka | L(bp) | Ts | Tv | Σ | π |
4G17 | 3 | 190 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 0.0052 | 0.0036 | 0.0200 | 0.0072 | 0 | 0 | 0 | 0 | 0.0000 |
9K1 | 23 | 199 | 3 | 1 | 3 | 7 | 1 | 0 | 1 | 2 | 5 | 4 | 9 | 0.0193 | 0.0107 | 0.1010 | 0.0270 | 0 | 0 | 0 | 0 | 0.0000 |
4J10 | 14 | 141 | 1 | 0 | 3 | 4 | 0 | 0 | 1 | 1 | 5 | 0 | 5 | 0.0116 | 0.0000 | 0.1300 | 0.0000 | 73 | 2 | 2 | 4 | 0.0157 |
6P3 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 179 | 6 | 2 | 8 | 0.0188 |
6P4 | 17 | 201 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0.0041 | 0.0000 | 0.0450 | 0.0000 | 189 | 8 | 3 | 11 | 0.0233 |
6P5 | 5 | 189 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0.0016 | 0.0000 | 0.0200 | 0.0000 | 112 | 2 | 0 | 2 | 0.0063 |
6Z1 | 14 | 444 | 1 | 0 | 5 | 6 | 0 | 0 | 5 | 5 | 8 | 3 | 11 | 0.0079 | 0.0022 | 0.0750 | 0.0088 | 29 | 1 | 0 | 1 | 0.0159 |
6Z3 | 14 | 453 | 1 | 0 | 13 | 14 | 1 | 0 | 5 | 6 | 18 | 2 | 20 | 0.0169 | 0.0011 | 0.1860 | 0.0057 | 0 | 0 | 0 | 0 | 0.0000 |
9J12 | 9 | 156 | 2 | 1 | 0 | 3 | 1 | 0 | 1 | 2 | 0 | 5 | 5 | 0.0117 | 0.0156 | 0.0000 | 0.0510 | 0 | 0 | 0 | 0 | 0.0000 |
9J14 | 14 | 174 | 0 | 0 | 3 | 3 | 2 | 0 | 0 | 2 | 3 | 2 | 5 | 0.0140 | 0.0077 | 0.0760 | 0.0150 | 0 | 0 | 0 | 0 | 0.0000 |
BU01 | 2 | 162 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0.0011 | 0.0000 | 0.0230 | 0.0000 | 26 | 0 | 0 | 0 | 0.0000 |
BU08 | 12 | 394 | 0 | 0 | 2 | 2 | 2 | 1 | 2 | 5 | 4 | 3 | 7 | 0.0042 | 0.0026 | 0.0470 | 0.0098 | 16 | 0 | 0 | 0 | 0.0000 |
Ache | 18 | 249 | 0 | 1 | 7 | 8 | 0 | 1 | 2 | 3 | 8 | 3 | 11 | 0.0149 | 0.0034 | 0.1460 | 0.0160 | 85 | 2 | 2 | 4 | 0.0180 |
BU10 | 16 | 294 | 1 | 0 | 3 | 4 | 0 | 0 | 2 | 2 | 5 | 1 | 6 | 0.0084 | 0.0024 | 0.0690 | 0.0045 | 245 | 3 | 1 | 4 | 0.0056 |
BU11 | 4 | 177 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0.0029 | 0.0039 | 0.0000 | 0.0074 | 53 | 0 | 1 | 1 | 0.0099 |
BU12 | 7 | 504 | 1 | 1 | 1 | 3 | 0 | 1 | 1 | 2 | 3 | 2 | 5 | 0.0032 | 0.0011 | 0.0240 | 0.0053 | 38 | 0 | 0 | 0 | 0.0000 |
BU13 | 19 | 363 | 2 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 1 | 2 | 3 | 0.0026 | 0.0029 | 0.0110 | 0.0073 | 148 | 2 | 5 | 7 | 0.0133 |
BU19 | 22 | 526 | 3 | 1 | 4 | 8 | 0 | 1 | 1 | 2 | 6 | 4 | 10 | 0.0072 | 0.0035 | 0.0490 | 0.0100 | 0 | 0 | 0 | 0 | 0.0000 |
BU021 | 17 | 267 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 4 | 0 | 4 | 0.0044 | 0.0000 | 0.0610 | 0.0000 | 67 | 2 | 2 | 4 | 0.0164 |
BU21 | 16 | 417 | 0 | 1 | 2 | 3 | 1 | 0 | 2 | 3 | 4 | 2 | 6 | 0.0073 | 0.0018 | 0.0510 | 0.0077 | 81 | 4 | 1 | 5 | 0.0256 |
BU25 | 2 | 234 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 111 | 2 | 0 | 2 | 0.0036 |
BU29 | 11 | 258 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 3 | 1 | 4 | 0.0038 | 0.0008 | 0.0540 | 0.0049 | 152 | 0 | 2 | 2 | 0.0029 |
BU34 | 11 | 231 | 0 | 0 | 2 | 2 | 0 | 2 | 2 | 4 | 4 | 2 | 6 | 0.0101 | 0.0051 | 0.0740 | 0.0113 | 28 | 0 | 0 | 0 | 0.0000 |
BU35 | 12 | 264 | 0 | 0 | 7 | 7 | 0 | 0 | 1 | 1 | 8 | 0 | 8 | 0.0071 | 0.0000 | 0.1280 | 0.0000 | 108 | 1 | 1 | 1 | 0.0039 |
BU40 | 14 | 255 | 2 | 1 | 1 | 4 | 1 | 0 | 0 | 1 | 1 | 4 | 5 | 0.0074 | 0.0076 | 0.0170 | 0.0200 | 415 | 3 | 2 | 5 | 0.0016 |
BU56 | 4 | 156 | 0 | 1 | 2 | 3 | 1 | 0 | 2 | 3 | 3 | 3 | 6 | 0.0214 | 0.0132 | 0.0710 | 0.0263 | 126 | 5 | 2 | 7 | 0.0331 |
BU58 | 7 | 261 | 1 | 0 | 2 | 3 | 0 | 1 | 1 | 2 | 3 | 2 | 5 | 0.0053 | 0.0019 | 0.0446 | 0.0103 | 20 | 0 | 0 | 0 | 0.0000 |
BU62 | 22 | 213 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0.0013 | 0.0000 | 0.0207 | 0.0000 | 260 | 7 | 5 | 12 | 0.0143 |
BU66 | 25 | 282 | 9 | 2 | 0 | 11 | 1 | 2 | 0 | 3 | 3 | 11 | 14 | 0.0174 | 0.0194 | 0.0503 | 0.0494 | 179 | 4 | 4 | 8 | 0.0099 |
BU70 | 5 | 228 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 2 | 2 | 4 | 0.0066 | 0.0015 | 0.0506 | 0.0059 | 62 | 0 | 1 | 1 | 0.0069 |
BU71 | 9 | 573 | 0 | 0 | 6 | 6 | 1 | 1 | 2 | 4 | 8 | 2 | 10 | 0.0044 | 0.0005 | 0.0615 | 0.0045 | 98 | 1 | 0 | 1 | 0.0051 |
BU72 | 20 | 354 | 2 | 1 | 2 | 5 | 2 | 1 | 1 | 4 | 3 | 6 | 9 | 0.0082 | 0.0062 | 0.0368 | 0.0220 | 195 | 1 | 1 | 2 | 0.0052 |
BU73 | 5 | 277 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 3 | 0 | 3 | 3 | 0.0039 | 0.0036 | 0.0000 | 0.0135 | 0 | 0 | 0 | 0 | 0.0000 |
BU76 | 15 | 330 | 0 | 0 | 7 | 7 | 1 | 1 | 1 | 3 | 9 | 1 | 10 | 0.0087 | 0.0008 | 0.1104 | 0.0041 | 154 | 3 | 3 | 6 | 0.0095 |
BU77 | 18 | 261 | 3 | 0 | 1 | 4 | 1 | 2 | 0 | 3 | 6 | 1 | 7 | 0.0125 | 0.0136 | 0.0166 | 0.0298 | 198 | 9 | 7 | 16 | 0.0345 |
BU82 | 13 | 228 | 0 | 0 | 2 | 2 | 0 | 2 | 0 | 2 | 2 | 2 | 4 | 0.0059 | 0.0025 | 0.0402 | 0.0112 | 88 | 2 | 2 | 4 | 0.0156 |
BU85 | 14 | 299 | 2 | 1 | 8 | 11 | 0 | 0 | 1 | 1 | 11 | 1 | 12 | 0.0108 | 0.0363 | 0.1155 | 0.0033 | 121 | 2 | 0 | 2 | 0.0087 |
BU88 | 16 | 441 | 2 | 0 | 12 | 14 | 0 | 0 | 2 | 2 | 16 | 0 | 16 | 0.0135 | 0.0000 | 0.1601 | 0.0000 | 212 | 9 | 4 | 13 | 0.0179 |
BU90 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 | 261 | 1 | 2 | 3 | 0.0021 |
BU92 | 11 | 345 | 3 | 1 | 3 | 7 | 1 | 1 | 1 | 3 | 5 | 5 | 10 | 0.0075 | 0.0031 | 0.0650 | 0.0186 | 110 | 5 | 3 | 8 | 0.0226 |
BU93 | 8 | 510 | 0 | 0 | 5 | 5 | 0 | 0 | 3 | 3 | 7 | 1 | 8 | 0.0035 | 0.0004 | 0.0626 | 0.0025 | 137 | 0 | 2 | 2 | 0.0023 |
BU98 | 4 | 369 | 0 | 0 | 5 | 5 | 0 | 0 | 2 | 2 | 7 | 0 | 7 | 0.0101 | 0.0000 | 0.0843 | 0.0000 | 158 | 2 | 6 | 8 | 0.0257 |
BU883 | 21 | 354 | 1 | 0 | 5 | 6 | 2 | 1 | 2 | 5 | 7 | 4 | 11 | 0.0120 | 0.0052 | 0.0913 | 0.0145 | 188 | 8 | 3 | 11 | 0.0189 |
BU897 | 19 | 303 | 0 | 0 | 2 | 2 | 3 | 1 | 2 | 6 | 3 | 5 | 8 | 0.0080 | 0.0078 | 0.0458 | 0.0210 | 167 | 4 | 3 | 7 | 0.0180 |
BU901 | 12 | 231 | 0 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 0.0035 | 0.0000 | 0.0552 | 0.0000 | 229 | 2 | 2 | 4 | 0.0065 |
BU973 | 5 | 471 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0.0015 | 0.0019 | 0.0000 | 0.0054 | 67 | 1 | 0 | 1 | 0.0028 |
BU974 | 3 | 459 | 0 | 0 | 2 | 2 | 0 | 0 | 1 | 1 | 3 | 0 | 3 | 0.0036 | 0.0000 | 0.0265 | 0.0000 | 52 | 1 | 0 | 1 | 0.0096 |
BU982 | 4 | 240 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 0.0030 | 0.0016 | 0.0190 | 0.0053 | 51 | 1 | 0 | 1 | 0.0107 |
BU996 | 18 | 543 | 4 | 0 | 2 | 6 | 1 | 1 | 1 | 3 | 6 | 3 | 9 | 0.0073 | 0.0019 | 0.0518 | 0.0070 | 87 | 6 | 6 | 12 | 0.0312 |
Kdr | 13 | 201 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 0 | 2 | 2 | 0.0020 | 0.0026 | 0.0000 | 0.0127 | 501 | 2 | 5 | 7 | 0.0039 |
Total | Â | 14671 | 45 | 17 | 139 | 201 | 25 | 23 | 54 | 102 | 206 | 97 | 303 | Â | Â | Â | Â | 5876 | 106 | 85 | 191 | Â |
Average | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | 0.0072 | 0.0041 | 0.0537 | 0.0097 | Â | Â | Â | Â | 0.0123 |