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Table 3 List of probe sets which are differentially expressed between Golden Promise and Maythorpe under unstressed

From: Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Probe set ID Putative Function Rice Chr. 5' Rice Gene Expression & Criteria q-value % fold change
Root Comparison       
   Contig8052_at splicing factor PWI domain protein 3 29429795 MT up; R 25 2.0
   Contig3842_at LEA protein 5 28987287 MT up; RSM 25 34.3
   Contig6165_at CCT motif protein 5 29573293 MT up; RSM 25 9.9
   Contig15475_at reticuline oxidase precursor 6 20743699 MT up; R 25 6.1
   Contig23396_at expressed protein - - MT up; RM 25 2.6
   Contig6845_at no hit - - GP up; RS 25 2.9
   Contig2510_at expressed protein - - GP up; R 25 1.8
   Contig25937_at structural maintenance of chr (SMC) - - GP up; R 25 1.7
   Contig17352_at expressed protein - - GP up; R 25 1.7
   HVSMEn0005L15f expressed protein - - GP up; R 25 1.7
   Contig18699_at zinc finger (C3HC4-type RING finger) 1 39965630 GP up; R 25 1.8
   Contig7273_s_at replication protein A2 2 25402499 GP up; R 25 5.0
   Contig25428_at RPA 32 kDa 2 25402499 GP up; RM 25 2.6
   Contig24975_at expressed protein 4 10975293 GP up; R 25 1.7
   Contig10006_at AAA-type ATPase family protein 5 29015582 GP up; R 25 2.2
Shoot Comparison       
   Contig3842_at LEA protein 5 28987287 MT up; SRYM 10 14.4
   Contig6165_at CCT motif protein 5 29573293 MT up; SRYM 10 5.7
   EBro08_SQ004_F05 expressed protein 3 2102803 MT up; SY 10 2.8
   HV_CEb0003E19r2 Auxin response factor 2 1 41022513 MT up; SM 10 2.0
   Contig6845_at no hit - - GP up; SRM 10 10.7
   S0000800234C01F1 expressed protein 7 5429853 GP up; SYM 10 3.3
   HX01D24w_at expressed protein 7 5429853 GP up; SYM 10 1.5
   Contig1846_s_at Catalase1 3 1769149 GP up; SY 10 3.4
   Contig11254_at floral homeotic protein (HUA1) 1 24805279 GP up; SY 10 3.4
  1. R: root GP-MT comparison of 25-day old plants; S: shoot GP-MT comparison of 25-day old plants; Y: shoot GP-MT comparison of 10-day old plants; M: multiple