|  | RT-PCR | Microarray |  | |||
---|---|---|---|---|---|---|---|
Transcript | Analysis | Fold change | p-valuea | Fold change | p-value | %P | Acceptable correlationb |
A. Undetectable by microarray | |||||||
TNFα |  |  |  |  |  |  |  |
 | TxNormal (0–12) | 1.62 | 0.288 | -1.05 | 0.051 | 0% | No |
 | TxFibrosis (0–12) | 2.05 | 0.061 | -1.01 | 0.728 | 0% | No |
IFNγ |  |  |  |  |  |  |  |
 | TxNormal (0–12) | 2.72 | 0.172 | -1.04 | 0.152 | 0% | No |
 | TxFibrosis (0–12) | 3.11 | 0.028 | 1.02 | 0.537 | 0% | No |
IL-10 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 1.54 | 0.271 | -1.05 | 0.058 | 0% | No |
 | TxFibrosis (0–12) | 3.02 | 0.000 | -1.05 | 0.134 | 0% | No |
TGFβ1 |  |  |  |  |  |  |  |
 | TxNormal (0–12) | 2.53 | 0.003 | -1.11 | 0.012 | 0% | No |
 | TxFibrosis (0–12) | 2.93 | 0.000 | -1.09 | 0.002 | 0% | No |
Fox-P3 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 2.56 | 0.030 | -1.07 | 0.029 | 0% | No |
 | TxFibrosis (0–12) | 2.33 | 0.000 | -1.13 | 0.001 | 0% | No |
B. Detectable by microarray | |||||||
GRZMA | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 7.25 | 0.021 | 1.32 | 0.072 | 42% | No |
 | TxFibrosis (0–12) | 9.21 | 0.000 | 2.06 | 0.000 | 50% | Yes |
IL-6 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | -12.50 | 0.029 | -1.26 | 0.008 | 79% | Yes |
 | TxFibrosis (0–12) | -7.69 | 0.005 | -1.23 | 0.000 | 63% | Yes |
FN1 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 2.84 | 0.001 | 2.78 | 0.020 | 93% | Yes |
 | TxFibrosis (0–12) | 2.50 | 0.002 | 2.01 | 0.001 | 94% | Yes |
IFNγ-R1 |  |  |  |  |  |  |  |
 | TxNormal (0–12) | 1.45 | 0.072 | 1.35 | 0.061 | 100% | Yes |
 | TxFibrosis (0–12) | 1.63 | 0.001 | 1.37 | 0.008 | 100% | Yes |
IER3 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | -2.80 | 0.016 | -2.54 | 0.000 | 100% | Yes |
 | TxFibrosis (0–12) | -2.24 | 0.005 | -1.70 | 0.000 | 100% | Yes |
STAT2 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 1.72 | 0.015 | 1.40 | 0.005 | 100% | Yes |
 | TxFibrosis (0–12) | 1.88 | 0.016 | 1.43 | 0.001 | 100% | Yes |
COL1A1 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 8.89 | 0.037 | 5.82 | 0.005 | 100% | Yes |
 | TxFibrosis (0–12) | 8.76 | 0.001 | 5.34 | 0.000 | 100% | Yes |
STAT1 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 2.06 | 0.001 | 1.89 | 0.000 | 100% | Yes |
 | TxFibrosis (0–12) | 2.80 | 0.002 | 2.19 | 0.000 | 100% | Yes |
VCAM1 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 1.42 | 0.168 | 1.34 | 0.254 | 100% | Yes |
 | TxFibrosis (0–12) | 2.43 | 0.000 | 2.00 | 0.000 | 100% | Yes |
PSMB8 | Â | Â | Â | Â | Â | Â | Â |
 | TxNormal (0–12) | 1.78 | 0.019 | 1.40 | 0.041 | 100% | Yes |
 | TxFibrosis (0–12) | 2.82 | 0.000 | 1.83 | 0.000 | 100% | Yes |