Table 2 The ten most significantly enriched genes in cortex, hippocampus, striatum and cerebellum, respectively, compared to all other samples
AB1700 Probe ID | Primary Gene IDa | Delta scoreb | Foldc | Gene Symbol | Gene Name | 'Validation'd | Source |
|---|---|---|---|---|---|---|---|
Cortex | |||||||
20757128 | 301423 | 21.2 | 11.5 | LOC501145 | similar to KIAA1034-like DNA binding protein | + | Human GeneAtlas |
20804233 | rCG56789 | 21.1 | 4.9 | unassigned | unassigned | NA e | No record |
22394757 | 116470 | 20.9 | 7.2 | Stx1a | syntaxin 1A (brain) | + | Ratlas |
22106387 | rCG41482 | 20.6 | 16.7 | unassigned | unassigned | NA | No record |
21180100 | 289440 | 20.5 | 5.1 | Abhd7 predicted | abhydrolase domain containing 7 (predicted) | NA | No record |
21191309 | 25033 | 20.1 | 7.4 | Sstr1 | somatostatin receptor 1 | - | Ratlas |
21546223 | 363102 | 18.8 | 5.3 | unassigned | unassigned | NA | No record |
20813345 | 312607 | 18.2 | 3.9 | Pdzrn3 predicted | PDZ domain containing RING finger 3 (predicted) | + | Mouse GeneAtlas |
21401322 | 311078 | 17.9 | 5.9 | LOC311078 | similar to T-Brain-1 | + | Mouse GeneAtlas |
21849766 | rCG63352 | 17.7 | 4.9 | unassigned | unassigned | NA | No record |
Hippocampus | |||||||
21875182 | 311861 | 33.3 | 14.4 | RGD1309097 predicted | similar to Hypothetical protein FLJ14810 (predicted) | + | Mouse GeneAtlas |
22010557 | 25153 | 25.8 | 9.3 | Mas1 | MAS1 oncogene | + | Ratlas |
22272616 | 288979 | 23.3 | 9.1 | LOC288979 | similar to complement component 1, q subcomponent-like 2 | + | Mouse GeneAtlas |
21357331 | 25672 | 18.9 | 5.1 | Nr3c2 | nuclear receptor subfamily 3, group C, member 2 | + | Ratlas |
21273900 | 24785 | 18.6 | 10.8 | Slc9a4 | solute carrier family 9, member 4 | - | Ratlas |
21372096 | 79247 | 17.9 | 11.2 | Htr5b | 5-hydroxytryptamine (serotonin) receptor 5B | + | Ratlas |
20746536 | rCG37048 | 17.6 | 6.8 | unassigned | unassigned (similar to Potassium channel tetramerisation domain containing 4) | + | Mouse GeneAtlas |
21740530 | 299757 | 17.3 | 27.4 | Nts predicted | neurotensin (predicted) | - | Mouse GeneAtlas |
21310693 | 54258 | 14.5 | 14.0 | Il8ra | interleukin 8 receptor, alpha | + | Ratlas |
21051913 | 288207 | 13.1 | 5.5 | LOC288207 | similar to Ephrin type-A receptor 6 precursor (Tyrosine-protein kinase receptor EHK-2) | + | Mouse GeneAtlas |
Striatum | |||||||
21655681 | 78974 | 46.3 | 68.1 | Six3 | sine oculis homeobox homolog 3 (Drosophila) | (+) | Mouse GeneAtlas |
22132190 | 360616 | 37.4 | 19.8 | Ppp1r1b | protein phosphatase 1, regulatory (inhibitor) subunit 1B | + | Mouse GeneAtlas |
21997003 | 83683 | 32.8 | 43.4 | Gpr6 | G protein-coupled receptor 6 | + | Ratlas |
21480082 | 29237 | 31.7 | 14.7 | Penk-rs | preproenkephalin, related sequence | + | Ratlas |
21561963 | 24318 | 30.5 | 50.7 | Drd2 | dopamine receptor 2 | + | Ratlas |
21849263 | 24611 | 30.3 | 18.7 | Gnal | guanine nucleotide binding protein, alpha stimulating, olfactory type | + | Ratlas |
22158395 | 313445 | 29.2 | 8.0 | Klhl13 | kelch-like 13 | + | Mouse GeneAtlas |
22195704 | 24316 | 29.1 | 31.4 | Drd1a | dopamine receptor 1A | + | Ratlas |
22424342 | 308717 | 28.8 | 30.5 | Slc35d3 predicted | solute carrier family 35, member D3 (predicted) | + | Mouse GeneAtlas |
21577759 | 29481 | 28.7 | 46.7 | Rgs9 | regulator of G-protein signaling 9 | + | Ratlas |
Cerebellum | |||||||
22368772 | 365008 | 58.5 | 38.8 | LOC361412 | similar to ADAMTS18 | - | Mouse GeneAtlas |
21761660 | rCG56756 | 43.2 | 202.3 | unassigned | unassigned | NA | No record |
21883963 | 498922 | 38.5 | 134.3 | LOC498922 | similar to cerebellin 1 precursor protein | + | Mouse GeneAtlas |
22259505 | 64618 | 37.8 | 49.5 | Zic1 | Zic family member 1 (odd-paired homolog, Drosophila) (HS) | + | Mouse GeneAtlas |
21062179 | 498921 | 36.6 | 17.6 | LOC498921 | LOC498921 | NA | No record |
22187648 | 499964 | 35.9 | 273.3 | LOC499964 | similar to engrailed 2 protein | + | Mouse GeneAtlas |
21989402 | 25509 | 32.6 | 17.7 | Pax6 | paired box gene 6 (TS) | + | Ratlas |
21979738 | 287424 | 31.0 | 10.0 | Aloxe3 predicted | arachidonate lipoxygenase 3 (predicted) | - | Mouse GeneAtlas |
21212636 | 29458 | 30.0 | 58.1 | Neurod1 | neurogenic differentiation 1 (TS) | + | Ratlas |
20988804 | 84012 | 28.5 | 51.3 | Slc1a6 | solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 (TS) | + | Ratlas |