Table 1 A portion of the table of p-values that accompany the DAG (Figure 3) from the analysis of the biological process ontology of cluster 6 of the Plasmodium data [40], showing the p-value calculated from the hypergeometric distribution, along with the Holm and FDR multiple hypothesis corrections.
From: MADIBA: A web server toolkit for biological interpretation of Plasmodium and plant gene clusters
Term | Definition | Corrected p-value (FDR) | Corrected p-value (Holm) | Uncorrected p-value |
|---|---|---|---|---|
GO:0019642 | anaerobic glycolysis | 0 | 0 | 0 |
GO:0006096 | Glycolysis | 3.6675E-06 | 0.00010971 | 7.2180E-07 |
GO:0005996 | monosaccharide metabolic process | 5.3464E-06 | 0.00016747 | 1.1091E-06 |
GO:0019318 | hexose metabolic process | 5.3464E-06 | 0.00016747 | 1.1091E-06 |
GO:0006094 | gluconeogenesis | 6.7072E-06 | 0.00021795 | 1.4627E-06 |
GO:0016051 | carbohydrate biosynthetic process | 6.7072E-06 | 0.00021795 | 1.4627E-06 |