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Table 2 List of selected putative P. viticola TDFs expressed in planta

From: cDNA-AFLP analysis of plant and pathogen genes expressed in grapevine infected with Plasmopara viticola

TDF Primer Comb. Lenght (bp) Homology Annotation Blast score
170 TC – TG 213 Ps_004_22448_Jun03 PROBABLE 50S RIBOSOMAL PROTEIN L1 [Sinorhizobium meliloti] 6.00E-05
1272 CT – TT 72 Pi_006_52843_Feb05 60S ribosomal protein L11 [Hyacinthus orientalis] 2.00E-05
1214 CT – AC 400 Ps_060_22857_Jun03 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] 7.00E-77
1390 CG – TT 114 Pi_001_74169_Feb05 RL35_EUPES 60S ribosomal protein L35 8.00E-09
1421 CG – CA 64 Pi_015_57096_Feb05 RL9_SPOFR 60S ribosomal protein L9 6.00E-05
1565 CG – GT 216 Pi_004_46349_Feb05 L-aspartate oxidase [Chromobacterium violaceum ATCC 12472] 1.00E-05
1132 CC – TG 89 Pi_001_82736_Feb05 Nascent polypeptide associated complex alpha chain prot. [A. thaliana] 6.00E-12
862 CA – AA 171 Pi_030_51789_Feb05 Polyubiquitin [Plasmodium falciparum 3D7] 5.00E-20
1228 CT – AC 89 Ps_016_22726_Jun03 Ubiquitin-conjugating enzyme e2-16 kd [S. pombe] 6.00E-09
1135 CC – TG 81 Pi_003_44814_Feb05 Actin depolymerizing factor – like protein [A. thaliana] 5.00E-09
1484 CT – GC 127 Pi_002_46251_Feb05 Fructose-1 6-biphosphatase [Phytophthora infestans] 5.00E-04
160 TC – TC 174 Ps_016_22911_Jun03 Myo-inositol-1-phosphate synthase [Nicotiana paniculata] 2.00E-22
83 TC – AC 240 Ps_005_22630_Jun03 Putative succinate dehydrogenase flavoprotein subunit [A. thaliana] 4.00E-12
394 TG – AC 277 Ps_001_26384_Jun03 Putative steroid binding protein [A. thaliana] 1.00E-12
241 TA – AC 288 Pi_004_52230_Feb05 Fatty acid synthase, subunit alpha – fission yeast (S. pombe) 1.00E-31
1604 TT – TG 81 Ps_029_22780_Jun03 14-3-3 protein epsilon [Xenopus laevis] 3.00E-07
875 CA – AT 203 Pi_003_45566_Feb05 ATPase, H+ transporting [Gallus gallus] 6.00E-14
1366 CG – AG 129 Ps_001_28794_Jun03 Putative beta-subunit of K+ channels [Solanum tuberosum] 5.00E-07
689 CA – GC 422 Ps_018_22812_Jun03 Mn superoxide dismutase [Chlamydomonas reinhardtii] 1.00E-105
542 TG – CG 170 Pi_018_51411_Feb05 Mitochondrial Mn3+ Superoxide Dismutase 4.00E-30
794 TC – GT 256 Ps_040_22917_Jun03 Homology to G protein beta subunit [Chlamydomonas reinhardtii] 1.00E-21
1410 CG – TG 289 Pi_005_48934_Feb05 C3HC4-type RING zinc finger protein-like [Oryza sativa ] 5.00E-12
270 TA – TA 182 Pi_009_51114_Feb05 GTP-binding protein ora3 – [Gallus gallus] 5.00E-05
239 TA – AC 92 Pi_001_76149_Feb05 NADH2 dehydrogenase (ubiquinone) [Canis familiaris] 1.00E-13
292 TA – TC 87 Pi_004_51216_Feb05 Probable atrazine chlorohydrolase [Chromobacterium violaceum ] 3.00E-07
1274 CT – TC 397 Pi_001_66405_Feb05 Putative citrate synthase [Saccharomyces kluyveri] 5.00E-81
552 TA – GA 222 Pi_002_43637_Feb05 Putative nuclear LIM interactor-interacting prot. [Phytophthora sojae] 3.00E-10
1010 CA – CC 521 Pi_003_48725_Feb05 S28245 NADH2 dehydrogenase (ubiquinone) 2.00E-34
208 TT – TA 64 Pi_004_48444_Feb05 T52339 ADP-ribosylation factor – pepper 6.00E-11
826 TC – GG 291 Pi_028_48244_Feb05 Vacuolar H+-pyrophosphatase [Prunus persica] 2.00E-58