Table 4 GO terms that are over represented or under represented in pathogenic F. graminearum versus non-pathogenic T. reesei
From: Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens
Generic GO Slim Ontology (GO) Term | Number of gene duplicates in pathogenic F. graminearum | Number of gene duplicates in non-pathogenic T. reesei | Initial significance value from chi-square test‡ | Corrected significance value§ |
|---|---|---|---|---|
catalytic activity | 3214 | 2784 | 1.69E-02 | 1.69E-01 |
transport | 1398 | 1086 | 2.29E-05 | 2.29E-03 |
transporter activity | 741 | 550 | 1.24E-04 | 6.22E-03 |
electron transport | 466 | 352 | 5.16E-03 | 1.65E-01 |
generation of precursor metabolites and energy | 559 | 436 | 9.66E-03 | 1.65E-01 |
lysosome†| 1 | 8 | 1.38E-02 | 1.65E-01 |
cytoplasm†| 729 | 762 | 1.19E-02 | 1.65E-01 |
organelle†| 1136 | 1166 | 6.95E-03 | 1.65E-01 |
intracellular†| 1425 | 1432 | 1.46E-02 | 1.65E-01 |
cell organization and biogenesis†| 280 | 314 | 1.48E-02 | 1.65E-01 |