Table 3 Thirty-two prognostic gene sets prepared from published reports
From: A gene sets approach for identifying prognostic gene signatures for outcome prediction
Gene set | Number (reported) | Number (unique) | Reference |
|---|---|---|---|
*11823860_ST2 | 231 | 164 | van't Veer et al. [13] |
11823860_ST3 | 2,460 | 1,818 | van't Veer et al. [13] |
11823860_ST4 | 430 | 314 | van't Veer et al. [13] |
12490681_70 | 70 | 50 | van de Vijver [1] |
12747878_ST2 | 177 | 144 | Huang et al. [52] |
12747878_ST3 | 168 | 160 | Huang et al. [52] |
12917485_ST6 | 606 | 564 | Sotiriou et al. [18] |
12917485_ST7 | 137 | 126 | Sotiriou et al. [18] |
12917485_ST8 | 706 | 635 | Sotiriou et al. [18] |
12917485_ST9 | 485 | 402 | Sotiriou et al. [18] |
14737219_CSR | 512 | 459 | Chang et al. [3] |
14737219_USR | 677 | 611 | Chang et al. [3] |
15034139_T2 | 45 | 31 | Zhao et al. [53] |
15073102_4 | 4 | 4 | Glinsky et al. [54] |
15073102_6 | 6 | 6 | Glinsky et al. [54] |
15073102_13 | 12 | 12 | Glinsky et al. [54] |
15073102_14 | 14 | 14 | Glinsky et al. [54] |
15591335_F1 | 21 | 21 | Paik et al. [6] |
15721473_T3 | 76 | 68 | Wang et al. [2] |
15931389_T3_stem | 11 | 11 | Glinsky et al. [55] |
15931389_ST2_14 | 14 | 14 | Glinsky et al. [55] |
15931389_ST2_CNS | 11 | 11 | Glinsky et al. [55] |
16141321_SDC2 | 500 | 398 | Miller et al. [19] |
16273092_catenin | 98 | 76 | Bild et al. [20] |
16273092_E2F3 | 298 | 238 | Bild et al. [20] |
16273092_myc | 332 | 192 | Bild et al. [20] |
16273092_RAS | 348 | 248 | Bild et al. [20] |
16273092_SRC | 75 | 58 | Bild et al. [20] |
16280042_AF1 | 64 | 61 | Pawitan et al. [16] |
16478745_ST1 | 242 | 207 | Sotiriou et al. [15] |
16707453_ST3 | 101 | 86 | Schuetz et al. [56] |
17076897_ADF3 | 52 | 52 | Teschendorff et al. [24] |