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Table 7 23 Putative outer membrane proteins (OM) derived the 2 out of 3 predictions with significant DBSubloc or/and GTD prediction

From: Genome-wide subcellular localization of putative outer membrane and extracellular proteins in Leptospira interrogans serovar Lai genome using bioinformatics approaches

Lai locus

LIC locus

Protein annotation

SWISS-PROTa

PDB codeb

LA3471

LIC10711

Iron-reglulated protein A/cytoplasmic membrane protein

P12608

1i5p

LA1161

LIC12524

Long-chain fatty acid transport protein/fatty acid transport protein

-

1kmo

LA1100

LIC12575

Outer membrane efflux protein/cytoplasmic membrane protein

-

1ek9

LA1445

LIC12307

Outer membrane efflux protein/OM- TolC superfamily

P50468

1ek9

LA3685

LIC10537

Outer membrane protein/PG- associated periplasmic protein

P38369

1r1m

LA0056

LIC10050

Outer membrane protein OmpA family/PG-associated CM protein

Q05146

1r1m

LA2318

LIC11623

Predicted outer membrane protein/outer membrane protein

-

1a0t

LA1968

LIC11935

Putative outer membrane protein/conserved hypothetical protein

-

1a0t

LA2444

LIC11506

Putative outer membrane protein/outer membrane protein

-

1fep

LB110

LIC20087

Putative outer membrane protein/outer membrane protein

-

1uyn

LA2242

LIC11694

TonB-dependent outer membrane receptor

P46359

1fep

LA3242

LIC10896

TonB-dependent outer membrane receptor

P37409

1kmo

LA0465

LIC10405

TPR-repeat-containing proteins/conserved hypothetical

P58937

-

LA3675

LIC10544

Hypothetical protein/outer membrane protein

-

1a0t

LA2063

LIC11851

Conserved hypothetical protein/cytoplasmic membrane protein

-

1by5

LA3102

LIC10998

Conserved hypothetical protein

P76115

1nqe

LA3675

LIC10544

Hypothetical protein/outer membrane protein

-

1a0t

LA2168

-

Hypothetical protein

P43153

1a0t

LA3809

LIC10439

Hypothetical protein

-

1a0t

LA1501

LIC12258

Hypothetical protein

-

2mpr

LA3552

LIC10647

Hypothetical protein/conserved hypothetical protein

-

1kmo

LA2818

LIC11211

Hypothetical protein/conserved hypothetical protein

-

2mpr

LA4059

LIC13238

Hypothetical protein/conserved hypothetical protein

-

1by5

LB279

LIC20214

Hypothetical protein/conserved hypothetical protein

-

1kmo

  1. Note a: Swiss-Prot ID derived from DBsubloc database, b: PDB code derived from GTD prediction