Probe Set ID | Probe No. | Gene Name | SNP | SNP type | SNP location | Estimate | q-value | Rank q < 0.05 | Rank q < 0.05, fold change > 2 |
---|---|---|---|---|---|---|---|---|---|
Ssc.14003.2.S1_at | 9 | RPS4X | R, Y | Transition | 15, 19 | -5.09342 | 9.90E-35 | 1 | 1 |
Ssc.14343.1.S1_at | 2 | TPT1 | Y | Transition | 10 | -3.66704 | 8.02E-32 | 2 | 2 |
Ssc.1341.1.S1_at | 8 | TKT | Y | Transition | 13 | -3.05487 | 4.13E-29 | 3 | 3 |
Ssc.16710.1.S1_at | 4 | Q9BTR0 | T/- | INDEL | 7 | -3.07201 | 1.67E-26 | 9 | 9 |
Ssc.11554.1.S1_at | 11 | MRPL39 | TAAG/---- | INDEL | 17 | -3.13603 | 4.80E-26 | 10 | 10 |
Ssc.2756.1.A1_at | 10 | MRPL22 | Y | Transition | 20 | -3.28928 | 6.28E-25 | 15 | 15 |
Ssc.20986.2.S1_at | 4 | GRN | R | Transition | 13 | -3.23164 | 1.66E-24 | 20 | 20 |
Ssc.24770.1.S1_at | 3 | PLAGL1 | Y | Transition | 14 | -1.23548 | 6.85E-19 | 61 | 61 |
Ssc.4324.2.A1_at | 4 | CAMLG | S | Transversion | 6 | -1.8121 | 4.49E-15 | 124 | 124 |
Ssc.55.1.S1_at | 9 | EGFR | Y | Transition | 10 | -1.5839 | 3.27E-14 | 154 | 154 |
Ssc.422.1.S1_at | 10 | IGF2R | W | Transition | 21 | -1.41267 | 1.60E-11 | 259 | 253 |
Ssc.21595.2.S1_at | 5 | GNAS | R | Transition | 19 | -1.59188 | 2.45E-09 | 401 | 371 |
Ssc.2315.1.A1_at | 11 | Q8N3R3 | S | Transversion | 8 | -1.77102 | 3.35E-08 | 521 | 447 |
Ssc.26344.1.S1_at | 11 | PAK3 | R | Transition | 9 | -1.12922 | 6.41E-08 | 561 | 474 |
Ssc.21857.1.S1_at | 11 | GRB10 | R | Transition | 5 | -0.88725 | 7.90E-08 | 576 | no rank |
Ssc.6989.1.A1_at | 5 | SFXN1 | Y | Transition | 17 | -1.33493 | 1.75E-07 | 627 | 509 |
Ssc.939.1.A1_at | 7 | RPL12 | K | Transversion | 20 | -3.21892 | 1.86E-07 | 637 | 514 |
Ssc.26344.1.S1_at | 4 | PAK3 | None | None | Â | 1.068089 | 2.30E-07 | 655 | 523 |
Ssc.12365.1.A1_at | 11 | ADAMTS1 | Y | Transition | 5 | -1.13449 | 0.000135 | 1345 | 718 |
Ssc.13476.1.A1_at | 1 | PEG10 | R | Transition | 10 | -1.94654 | 0.000221 | 1444 | 732 |
Ssc.2716.1.A1_at | 6 | NP_055322 | None | None | Â | -1.39706 | 0.000241 | 1472 | 736 |
Ssc.7604.2.A1_a_at | 11 | C14orf111 | M | Transversion | 16 | -1.52629 | 0.000994 | 1871 | 783 |
Ssc.1595.1.S1_at | 1 | PHEMX | None | None | Â | 0.973961 | 0.001016 | 1884 | no rank |
Ssc.26460.1.A1_at | 1 | SNRPN | None | None | Â | -0.66999 | 0.00147 | 2003 | no rank |
Ssc.11508.1.A1_at | 7 | GABRA5 | None | None | Â | 0.473879 | 0.00433 | 2450 | no rank |
Ssc.3850.1.S1_at | 11 | NNAT | None | None | Â | -1.00118 | 0.008733 | 2860 | 822 |
Ssc.3802.1.S1_at | 2 | NAP1L4 | A/- | INDEL | 6 | -0.59859 | 0.02431 | 3704 | no rank |