Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays

BMC Genomics

Table 5 Comparison of predicted SFPs using same versus divergent tissues

			divergent tissues: day 25 Meishan placenta, day 30 occidental fibroblast
			SFPs	non-SFPs
			4,873	259, 743
same tissues: day 25 Meishan placenta, day 25 occidental placenta	SFPs	857	588	269
	non-SFPs	263,759	4,285	259,474

Predicted SFPs and non-SFPs from analysis of microarray data from same tissues are in rows; predicted SFPs and non-SFPs from divergent tissues are in columns. 588 are predicted by both analyses, where 16 are expected by random chance.
Chi-squared = 21,205, df = 1, p-value < 0.00001

ISSN: 1471-2164