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Table 4 Experimental haplotypes H1 to H10

From: Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT

Hapl.

SNP139

SNP143

SNP152

SNP157

SNP178

SNP214

SNP218

SNP236

SNP244

SNP253

SNP273

SNP274

Fr. [%]

H1

A

G

T

T

G

C

C

C

C

T

G

T

26.3

H2

A

G

T

T

G

C

A

C

T

C

T

A

1.3

H3

G

G

T

T

G

C

C

C

C

T

G

T

2.6

H4

A

A

T

G

A

C

C

C

T

T

G

A

2.6

H5

G

G

T

T

G

C

A

C

T

C

T

A

19.7

H6

G

G

T

T

G

T

A

C

T

C

T

A

2.6

H7

G

G

A

T

G

C

A

C

T

C

T

A

1.3

H8

G

G

A

T

G

C

C

T

C

T

G

A

38.1

H9

G

G

A

T

G

C

C

C

C

T

G

A

1.3

H10

G

G

T

T

G

C

C

C

C

T

G

A

3.9

  1. Experimental haplotypes for potato locus BA213c14t7 resulting from the analysis of nineteen tetraploid individuals (Table 5). SNP sites 139–274 (Figure 9). Values for allele frequency of each haplotype within the nineteen genotypes are based on the model for the most probable genotypes (Table 5) with a maximum of seventy-six possible alleles in this sub-population (100%). Hapl., haplotype. Fr., frequency.
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