Table 2 GO Term finder results for genes up-regulated by daunorubicin
From: Selective inhibition of yeast regulons by daunorubicin: A transcriptome-wide analysis
Gen Ontology Term clustering | |||
|---|---|---|---|
Functional categories | GOID | GOID- associated functions | |
A | 32196; 32197 | Transposition, Ty metabolism | |
B | 27; 460; 466; 6364; 6396; 6996; 16043; 16070; 16072; 22613; 22618; 42254; 42255; 42257; 42273; 43170; 65003 | Ribosome assembling (Protein and rRNA) Proteolysis. Ubiquitin- | |
C | 6508; 6511; 19941; 30163; 43632; 44257; 51603 | mediated preoteolysis. | |
Gene Clustering | |||
Distribution among functional categories | Genes | Main gene functions | Number of genes |
A only | FCY1; FRQ1; HIS7; PCL1; PHO11; SER3; SIT1; SPE3; SPE4; TRP1; URA5; YBL005W-B; YBR012W-B; YCL019W; YDR034C-D; YDR098C-B; YDR210C-D; YDR261C-D; YDR261W-B; YDR316W-B; YDR365W-B; YER138C; YER160C; YFL002W-A; YGR038C-B; YGR161W-B; YHR214C-B; YHR214C-C; YJR027W; YJR029W; YLR035C A; YLR157C-B; YLR227W-B; YLR410W-B; YML039W; YMR045C; YMR050C; YNL054W-B; YPR137C-B; YPR158W-B | Ty genes | 40 |
B only | ACC1; ANB1; ARL1; BFR1; CAF20; CBF5; CCT5; CDC33; CDC60; COP1; CPR6; DIB1; DPB4; DST1; FPR1; HCH1; HIR1; HRP1; HRR25; ILS1; IMP4; KAP123; KRI1; KRR1; LOS1; MGM101; NAT3; NIP7; NMD3; NOP12; NOP58; NPT1; NRD1; OST3; PFS2; RDI1; RLP7; RNA14; RNH70; RPA49; RPC10; RPC31; RPC40; RPG1; RPL13B; RPL32; RPL34B; RPL6A; RPL6B; RPO26; RPS11B; RPS19A; RPS26A; RPS4B; RPS8A; RRP4; RRP5; RRP9; RRS1; RSC6; RVB2; SAS10; SEC21; SEC65; SEC72; SES1; SMD3; SNT309; SPB1; SSF1; SSP120; SUI1; SUI2; SXM1; TIF11; TIF34; TIF35; TIP1; TPM1; TPM2; UBA1; UBC13; YFH1; YIL127C; YKT6; YNL296W; YOR021C; YPT31 | Ribosomal protein genes, rRNA metabolism, translation. | 87 |
C>B | CDC20; HRT1; PRE10; PRE2; PRE3; PRE9; PUP2; RPN10; RPT3; SKP1; SNF8; STS1; UBC1; UBC4; UBC6 | Endopeptidases, ubiquitin-protein ligases | 15 |
No GO Term | 53 | ||