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Table 1 GenMAPP pathways affected by a 1-h exposure of duodenal mucosa to L. plantarum WCFS1

From: Identification of the transcriptional response of human intestinal mucosa to Lactobacillus plantarum WCFS1 in vivo

GO Name Changed Measured Total
caveola 3 4 4
Golgi stack 3 10 12
protein biosynthesis 20 173 252
peptidyl-prolyl cis-trans isomerase activity 6 26 32
protein metabolism 3 13 16
structural constituent of ribosome 18 153 232
isomerase activity 11 77 96
cytosolic large ribosomal subunit (sensu Eukarya) 7 38 39
cytoplasm 35 512 636
ribosome 13 117 167
heterogeneous nuclear ribonucleoprotein complex 4 16 17
translational initiation 3 18 26
endoplasmic reticulum 22 234 271
ER to Golgi transport 4 18 20
GTPase activity 3 21 38
regulation of translational initiation 4 25 32
fatty acid beta-oxidation 3 12 13
ubiquitin conjugating enzyme activity 7 46 75
chymotrypsin activity 10 79 119
catalytic activity 6 96 210
regulation of translation 3 24 27
metabolism 19 243 408
trypsin activity 10 79 134
cytosolic small ribosomal subunit (sensu Eukarya) 5 29 30
  1. Biological processes with relatively high numbers of gene reporters changed, based on the Gene Ontology (GO) database. The table shows the process title (GO name), the number of gene reporters changed changed (changed), measured with the microarrays (measured) and the total number of genes present in the pathway MAPP (total) (for detailed description of pathway selection, see Methods).