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Table 3 Comparison of fold-changes obtained for genes by microarray and by TaqMan RT-PCR

From: Altered gene expression in highly purified enterocytes from patients with active coeliac disease

Gene

RT-PCR fold-change

Microarray fold-change

Peroxisome biogenesis factor 13 (PEX13)

1.62

2.28

Gap junction protein, alpha 4, (GJA4, aka connexin 37)

4.09

1.95

Syntaxin 3A (STX3A)

1.52

1.81

3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (HMGCS1)

1.25

0.54

Sterol regulatory element binding transcription factor 1 (SREBF1)

1.26

4.53

Nudix (nucleoside diphosphate linked moiety X)-type motif 2

3.02

2.21

Small proline-rich protein 3 (SPRR3, aka Esophagin)

1.77

2.1

Sialic acid binding Ig-like lectin 6 (SIGLEC6)

3.14

1.89

Laminin 5, alpha 3 (LAMA3)

1.94

2.51

Low density lipoprotein receptor-related protein 6 (LRP6)

1.04

2.12