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Table 2 Citrus clementina BAC end sequencing summary

From: Development of genomic resources for Citrus clementina: Characterization of three deep-coverage BAC libraries and analysis of 46,000 BAC end sequences

Library CCL1 CCER1 CCH3 Total
Processed BACs 9,216 9,216 9,600 28,032
Positive BACs 8581 7262 8378 24,221
Success rate 93.1% 78.8% 87.3% 86.4%
BES mate pairsa 8036 6401 7681 22,118
Genomic equivalentsb 3.1 3.1 3.9 10.1
Reads 16,617 13,663 16,059 46,339
Success rate 90% 74% 84% 83%
Total raw sequence (bp) 10,102,329 8,783,997 9,676,620 28,562,946
Average read length (bp) 638.0 679.6 644.3 652.8
Chloro/mito readsc 432 146 204 782
Chloro/mito total sequence (bp) 273,452 94,570 111,324 479,346
Final genomic sequence (bp)d 9,828,877 8,689,427 9,565,296 28,083,600
  1. a BAC clones with 5' and 3' good quality reads
  2. b Genomic equivalents calculated considering the number of clones sequenced and their average length
  3. c Reads identified as chloroplastic or mitochondrial DNA
  4. d Total genomic sequence obtained, without mitochondrial or chloroplastic DNA