Number of elements | Length (bp) | Sequence (%) | Number of elements (%) | |
---|---|---|---|---|
Retroelements | ||||
LINEs | ||||
L1/CIN4 | 360 | 67,719 | 0.237% | 3.74% |
LTR elements | ||||
Ty1/Copia | 3,770 | 1,142,096 | 3.999% | 39.20% |
Gypsy/DIRS1 | 3,917 | 1,172,005 | 4.103% | 40.73% |
Other | 265 | 6,939 | 0.024% | 2.76% |
Total Retroelements | 8,312 | 2,388,759 | 8.363% | 86.42% |
DNA transposons | ||||
hobo-Activator | 346 | 64,065 | 0.224% | 3.60% |
Tc1-IS630-Pogo | 97 | 10,162 | 0.036% | 1.01% |
En-Spm | 381 | 55,814 | 0.195% | 3.96% |
MuDR-IS905 | 386 | 29,983 | 0.105% | 4.01% |
Tourist/Harbinger | 13 | 1,400 | 0.005% | 0.14% |
Other | 83 | 5,653 | 0.020% | 0.86% |
Total DNA transposons | 1,306 | 167,077 | 0.585% | 13.58% |
Total interspersed repeats | 9,618 | 2,555,836 | 8.948% |