From: POEM, A 3-dimensional exon taxonomy and patterns in untranslated exons
Moniker | Brief | Description |
---|---|---|
F.B.5UTR | First, Beginning, wholly in 5' UTR | The most 5' exon in a gene, which is also the beginning of multiple exons wholly within the 5' UTR. |
F.B.T | First, Beginning, wholly in the translated region | The most 5' exon in a gene, which is also the beginning of multiple exons wholly within the translated region. |
F.S.5UTR | First, Intronless, wholly in 5' UTR | The most 5' exon in a gene, which is also the only exon in the 5' UTR. |
F.S.T | First, Intronless, wholly in the translated region | The most 5' exon in a gene, which is also the only exon in the translated region. |
F.TU | First, Translated-Untranslated | The most 5' exon in a gene, which also spans the entire translated region and the 3' CDS boundary. |
F.UT | First, Untranslated-Translated | The most 5' exon in a gene, which begins in the 5' UTR and ends in the translated region. |
F.UTU | First, Untranslated-Translated-Untranslated | The most 5' exon in a gene, which begins in the 5' UTR and ends in the 3' UTR. |
I.B.3UTR | Internal, Beginning, wholly in 3' UTR | A non-terminal exon that is also which is also the beginning of multiple exons wholly within the 3' UTR. |
I.B.T | Internal, Beginning, wholly in the translated region | A non-terminal exon that is also which is also the beginning of multiple exons wholly within the translated region. |
I.E.5UTR | Internal, End, wholly in 5' UTR | A non-terminal exon that is also which is also the end of multiple exons wholly within the 5' UTR. |
I.E.T | Internal, End, wholly in the translated region | A non-terminal exon that is also which is also the end of multiple exons wholly within the translated region. |
i.m.3utr | Internal, Middle, wholly in 3' UTR | A non-terminal exon that is also which is surrounded by exons which are wholly in the 3' UTR. |
i.m.5utr | Internal, Middle, wholly in 5' UTR | A non-terminal exon that is also which is surrounded by exons which are wholly in the 5' UTR. |
i.m.t | Internal, Middle, wholly in the translated region | A non-terminal exon that is also which is surrounded by exons which are wholly in the translated region. |
I.S.T | Internal, Intronless, wholly in the translated region | A non-terminal exon that is also which is also the only exon in the translated region. |
I.TU | Internal, Translated-Untranslated | A non-terminal exon that is also which begins in the translated region and ends in the 3' UTR. |
I.UT | Internal, Untranslated-Translated | A non-terminal exon that is also which begins in the 5' UTR and ends in the translated region. |
I.UTU | Internal, Untranslated-Translated-Untranslated | A non-terminal exon that is also which begins in the 5' UTR and ends in the 3' UTR. |
L.E.3UTR | Last, End, wholly in 3' UTR | The most 3' exon in a gene, which is also the end of multiple exons wholly within the 3' UTR. |
L.E.T | Last, End, wholly in the translated region | The most 3' exon in a gene, which is also the end of multiple exons wholly within the translated region. |
L.S.3UTR | Last, Intronless, wholly in 3' UTR | The most 3' exon in a gene, which is also the only exon in the 3' UTR. |
L.S.T | Last, Intronless, wholly in the translated region | The most 3' exon in a gene, which is also the only exon in the translated region. |
L.TU | Last, Translated-Untranslated | The most 3' exon in a gene, which begins in the translated region and ends in the 3' UTR. |
L.UT | Last, Untranslated-Translated | The most 3' exon in a gene, which begins in the 5' UTR and ends in the translated region. |
L.UTU | Last, Untranslated-Translated-Untranslated | The most 3' exon in a gene, which begins in the 5' UTR and ends in the 3' UTR. |
1.T | Intronless, Translated | An intronless gene exists only in the translated region. |
1.TU | Intronless, Translated-Untranslated | An intronless gene which also spans the entire translated region and the 3' CDS boundary. |
1.UT | Intronless, Untranslated-Translated | An intronless gene which also spans the 5' CDS boundary and the entire translated region. |
1.UTU | Intronless, Untranslated-Translated-Untranslated | An intronless gene which begins in the 5' UTR and ends in the 3' UTR. |