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Table 2 Results of the simple and multiple linear regression analyses

From: The rules of gene expression in plants: Organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana

Explanatory variable(s) Data Source r2 p Coefficient
Methylation frequency [24, 25] 0.8 <2E-16 n.r.
   0.8 <2E-16 n.r.
Frequency of genes target of H3k27me3 [30] 0.12 0.000207 n.r.
Gene size TAIR Genome v6.0 0.02 >0.01 n.r.
Cis -acting elements [48] 0.05 >0.01 n.r.
TATA-box frequency (MotifSearch, [26])
(PlantProm, [26])
0.49
0.68
<2E-16
<2E-16
n.r.
n.r.
Methylation + TATA-box [24]+ (MotifSearch, [26]) 0.84 <2E-16a
0.0002b
-201.5a
35b
  [24] + (PlantProm, [26]) 0.86 <2E-16a
1.00E-09b
-168a
50.5b
  [25] + (MotifSearch, [26]) 0.87 2.00E-16a
5.00E-09b
-158.6a
54.8b
  [25] + (PlantProm, [26]) 0.84 <2E-16a
0.0006b
-194.3a
39b
  1. Column 1 reports the explanatory variables used to model gene responsiveness. Column 2 indicates the source of the data (reference). Columns 3 and 4 report the different statistics obtained with the linear regression. n.r., not reported; n.d., not determined. a, statistics for methylation variable. b, statistics for TATA-box variable. Column 5 shows the coefficients from the linear regression analysis.