Table 1 Summary of the EST Assembly
From: Quality assessment parameters for EST-derived SNPs from catfish
Number of sequences for assembly | 54,960 |
   blue catfish | 10,523 |
   channel catfish | 44,437 |
Number of contigs | 5,670 |
Number of singletons | 23,598 |
Number of putative transcripts | 29,268 |
Average contig size | 5.5 |
Average contig length (bp) | 1,001 |
No of contig with: | Â |
   2 ESTs | 3,003 |
   3 ESTs | 980 |
   4 ESTs | 468 |
   5 ESTs | 263 |
   6–10 ESTs | 469 |
   11–20 ESTs | 246 |
   21–30 ESTs | 95 |
   31–50 ESTs | 72 |
   > 50 ESTs | 74 |