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Table 4 Types of patterns among conserved preferred codon pairs

From: Preferred and avoided codon pairs in three domains of life

preferred pattern % among avoided pairs the effect is stronger in ORFeome (%) the effect is stronger in whole genome (%)
type 1P nnGCnn 21.0 70.6 29.4
type 2P nnCAnn 13.6 63.6 36.4
type 3P nnUUnn 11.1 100.0 0.0
type 4P nnUnCn 9.9 75.0 25.0
  1. The percentage of codon pairs of the corresponding pattern among all conserved preferred codon pairs is shown. For specific codon pairs of each type see [additional file 5].