From: Transcriptional response of Mexican axolotls to Ambystoma tigrinum virus (ATV) infection
Gene ID | Gene Name | 24 hr | 72 hr | 144 hr |
---|---|---|---|---|
immune response | Â | Â | Â | Â |
SRV_03329_at | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS 5 | 11.85 | 82.22 | 91.04 |
SRV_01342_at | INTERFERON REGULATORY FACTOR 1 | 1.94 | 12.71 | 12.79 |
SRV_01343_a_at | INTERFERON REGULATORY FACTOR 1 | 2.10 | 16.07 | 15.63 |
SRV_13637_a_at | INTERFERON INDUCED TRANSMEMBRANE PROTEIN 3 (1–8 U) | 1.75 | 8.48 | 10.88 |
SRV_01199_a_at | CLUSTERIN | 1.05 | 4.35 | 8.02 |
SRV_00442_at | SOLUTE CARRIER FAMILY 11 (PROTON-COUPLED DIVALENT METAL ION TRANSPORTERS), MEMBER 1 | 1.28 | 6.17 | 5.38 |
SRV_01303_a_at | GUANYLATE BINDING PROTEIN 1, INTERFERON-INDUCIBLE, 67 KDA | 1.10 | 2.35 | 2.49 |
SRV_02828_at | 2'-5'-OLIGOADENYLATE SYNTHETASE 3, 100 KDA | 2.47 | 13.56 | 9.35 |
SRV_02072_at | CATHEPSIN S | 1.54 | 5.51 | 6.43 |
SRV_02588_a_at | LECTIN, GALACTOSIDE-BINDING, SOLUBLE, 3 BINDING PROTEIN | 4.04 | 26.37 | 24.40 |
SRV_02586_at | LECTIN, GALACTOSIDE-BINDING, SOLUBLE, 3 BINDING PROTEIN | 3.88 | 21.30 | 18.03 |
response to virus | Â | Â | Â | Â |
SRV_03073_at | INTERFERON-INDUCED PROTEIN 44 | 2.05 | 9.44 | 13.16 |
SRV_01439_a_at | MYXOVIRUS (INFLUENZA VIRUS) RESISTANCE 1, INTERFERON-INDUCIBLE PROTEIN P78 (MOUSE) | 3.13 | 29.23 | 36.80 |
SRV_01441_at | MYXOVIRUS (INFLUENZA VIRUS) RESISTANCE 1, INTERFERON-INDUCIBLE PROTEIN P78 (MOUSE) | 3.26 | 28.24 | 35.84 |
SRV_04604_s_at | INTERFERON INDUCED WITH HELICASE C DOMAIN 1 | 6.81 | 27.34 | 24.15 |
SRV_04604_at | INTERFERON INDUCED WITH HELICASE C DOMAIN 1 | 7.27 | 25.43 | 22.62 |
SRV_04518_at | RIBONUCLEASE L (2',5'-OLIGOISOADENYLATE SYNTHETASE-DEPENDENT) | 3.30 | 7.38 | 8.66 |
cell defense response | Â | Â | Â | Â |
SRV_00353_at | NEUTROPHIL CYTOSOLIC FACTOR 2 (65 KDA, CHRONIC GRANULOMATOUS DISEASE, AUTOSOMAL 2) | 1.05 | 2.07 | 1.73 |
SRV_00264_a_at | MYELOPEROXIDASE | 1.60 | 7.60 | 4.10 |
antigen processing and presentation | Â | Â | Â | Â |
SRV_05347_at | PROTEASOME (PROSOME, MACROPAIN) SUBUNIT, BETA TYPE, 9 (LARGE MULTIFUNCTIONAL PEPTIDASE 2) | 1.27 | 3.73 | 4.25 |
lysosome/endosome | Â | Â | Â | Â |
SRV_02581_a_at | LYSOSOMAL-ASSOCIATED MEMBRANE PROTEIN 1 | 1.23 | 2.26 | 2.06 |
SRV_12596_at | EH-DOMAIN CONTAINING 1 | 1.22 | 4.16 | 3.47 |
inflammatory response | Â | Â | Â | Â |
SRV_10702_at | CYTOCHROME B-245, BETA POLYPEPTIDE (CHRONIC GRANULOMATOUS DISEASE) | 1.69 | 5.58 | 4.40 |
SRV_00330_at | CYTOCHROME B-245, BETA POLYPEPTIDE (CHRONIC GRANULOMATOUS DISEASE) | 1.59 | 4.74 | 3.89 |
SRV_01877_at | CHEMOKINE (C-X-C MOTIF) RECEPTOR 4 | 1.29 | 5.70 | 8.08 |
SRV_02292_at | N-myc (and STAT) interactor | 1.15 | 2.29 | 2.29 |
SRV_00453_a_at | TRANSFORMING GROWTH FACTOR, BETA 1 (CAMURATI-ENGELMANN DISEASE) | 1.12 | 2.19 | 2.18 |
SRV_01617_a_at | PENTRAXIN-RELATED GENE, RAPIDLY INDUCED BY IL-1 BETA | 2.83 | 12.82 | 17.76 |
cell cycle | Â | Â | Â | Â |
SRV_02067_at | POLO-LIKE KINASE 3 (DROSOPHILA) | 0.93 | 3.82 | 6.18 |
SRV_11882_s_at | RAS HOMOLOG GENE FAMILY, MEMBER B | 1.18 | 2.33 | 2.40 |
SRV_02051_at | RAS HOMOLOG GENE FAMILY, MEMBER B | 1.26 | 2.15 | 2.28 |
SRV_02050_at | RAS HOMOLOG GENE FAMILY, MEMBER B | 1.23 | 2.51 | 2.55 |
SRV_00154_at | EXOSTOSES (MULTIPLE) 1 | 0.90 | 2.07 | 1.90 |
glycolysis | Â | Â | Â | Â |
SRV_01520_at | pyruvate kinase, muscle | 1.41 | 4.60 | 4.22 |
SRV_01519_a_at | pyruvate kinase, muscle | 1.56 | 5.94 | 5.48 |
B_s_at | ALDOLASE A, FRUCTOSE-BISPHOSPHATE | 1.22 | 3.14 | 2.96 |
transcription | Â | Â | Â | Â |
SRV_01351_at | JUN B PROTO-ONCOGENE | 1.76 | 7.82 | 7.54 |
SRV_01336_a_at | INHIBITOR OF DNA BINDING 3, DOMINANT NEGATIVE HELIX-LOOP-HELIX PROTEIN | 1.56 | 3.14 | 3.57 |
SRV_02310_at | EUKARYOTIC TRANSLATION TERMINATION FACTOR 1 | 0.95 | 2.70 | 2.45 |
SRV_03646_at | SPEN HOMOLOG, TRANSCRIPTIONAL REGULATOR (DROSOPHILA) | 1.15 | 2.22 | 2.30 |
SRV_02571_at | HAIRY AND ENHANCER OF SPLIT 1, (DROSOPHILA) | 1.23 | 4.52 | 6.10 |
complement | Â | Â | Â | Â |
SRV_00137_a_at | COMPLEMENT COMPONENT 3 | 1.80 | 9.79 | 13.66 |
SRV_01145_a_at | COMPLEMENT FACTOR B | 3.46 | 18.33 | 20.05 |
apoptosis | Â | Â | Â | Â |
SRV_02399_a_at | MATRIX METALLOPEPTIDASE 9 (GELATINASE B, 92 KDA GELATINASE, 92 KDA TYPE IV COLLAGENASE) | 2.19 | 6.79 | 8.78 |
SRV_02516_at | HEAT SHOCK 70 KDA PROTEIN 5 (GLUCOSE-REGULATED PROTEIN, 78 KDA) | 2.70 | 10.28 | 7.60 |
SRV_04970_a_at | CASPASE RECRUITMENT DOMAIN FAMILY, MEMBER 6 | 1.35 | 4.78 | 4.80 |
SRV_08154_a_at | HEAT SHOCK 70 KDA PROTEIN 9B (MORTALIN-2) | 1.18 | 3.45 | 2.71 |
SRV_04300_a_at | CYTOCHROME C, SOMATIC | 1.30 | 2.80 | 2.64 |
SRV_02132_at | EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON 1 | 1.21 | 3.56 | 3.38 |
SRV_01812_a_at | HEAT SHOCK PROTEIN 90 KDA BETA (GRP94), MEMBER 1 | 1.31 | 3.53 | 3.26 |
SRV_03753_at | GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE, BETA | 1.39 | 7.34 | 8.89 |
SRV_03023_a_at | GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE, GAMMA | 1.00 | 3.73 | 5.99 |
metabolic process | Â | Â | Â | Â |
SRV_05147_a_at | SYNDECAN BINDING PROTEIN (SYNTENIN) | 1.27 | 4.78 | 4.42 |
SRV_00332_a_at | glucose-6-phosphate dehydrogenase | 1.32 | 4.55 | 3.35 |
SRV_00292_a_at | PHOSPHOMANNOMUTASE 2 | 1.14 | 2.61 | 2.65 |
SRV_01737_a_at | UDP-N-ACTEYLGLUCOSAMINE PYROPHOSPHORYLASE 1 | 1.84 | 2.18 | 2.59 |
SRV_05108_a_at | PHOSPHOSERINE AMINOTRANSFERASE 1 | 1.12 | 1.97 | 2.48 |
C_s_at | ALDOLASE A, FRUCTOSE-BISPHOSPHATE | 1.15 | 2.42 | 2.27 |
A_s_at | ALDOLASE A, FRUCTOSE-BISPHOSPHATE | 1.24 | 3.64 | 3.39 |
SRV_00129_a_at | ALDOLASE B, FRUCTOSE-BISPHOSPHATE | 1.26 | 2.30 | 2.13 |
SRV_02002_at | CARBOXYLESTERASE 1 (MONOCYTE/MACROPHAGE SERINE ESTERASE 1) | 1.28 | 3.86 | 2.38 |
signal transduction | Â | Â | Â | Â |
SRV_02657_at | PRE-B-CELL COLONY ENHANCING FACTOR 1 | 1.61 | 7.61 | 7.01 |
SRV_03054_at | MACROPHAGE RECEPTOR WITH COLLAGENOUS STRUCTURE | 2.17 | 8.20 | 6.82 |
SRV_01818_at | THIOREDOXIN | 1.19 | 3.29 | 3.51 |
SRV_01313_a_at | GRANULIN | 1.45 | 3.72 | 3.40 |
SRV_01462_at | NUCLEAR FACTOR OF KAPPA LIGHT POLYPEPTIDE GENE ENHANCER IN B-CELLS 2 (P49/P100) | 1.59 | 3.67 | 2.77 |
SRV_03006_a_at | IQ MOTIF CONTAINING GTPASE ACTIVATING PROTEIN 2 | 1.23 | 2.59 | 2.69 |
SRV_01480_at | PURINERGIC RECEPTOR P2Y, G-PROTEIN COUPLED, 2 | 1.47 | 3.17 | 2.44 |
SRV_02894_a_at | CAP, ADENYLATE CYCLASE-ASSOCIATED PROTEIN 1 (YEAST) | 1.10 | 2.09 | 1.76 |
SRV_00844_a_at | CHLORIDE INTRACELLULAR CHANNEL 1 | 1.15 | 1.95 | 2.10 |
membrane | Â | Â | Â | Â |
SRV_03227_at | NIDOGEN 2 (OSTEONIDOGEN) | 1.42 | 3.69 | 4.29 |
SRV_01179_a_at | CD63 ANTIGEN (MELANOMA 1 ANTIGEN) | 1.34 | 3.82 | 3.97 |
SRV_02687_s_at | MANNOSE-6-PHOSPHATE RECEPTOR BINDING PROTEIN 1 | 1.30 | 4.82 | 3.55 |
SRV_04888_a_at | UDP-GLCNAC:BETAGAL BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 5 | 2.41 | 4.44 | 3.50 |
SRV_04819_a_at | TRANSMEMBRANE PROTEIN 49 | 1.46 | 3.40 | 3.20 |
SRV_04070_a_at | LEUCINE RICH REPEAT CONTAINING 59 | 1.22 | 2.48 | 2.78 |
SRV_03407_at | FER-1-LIKE 3, MYOFERLIN (C. ELEGANS) | 1.22 | 2.67 | 3.81 |
SRV_05439_at | HYPOTHETICAL PROTEIN LOC441168 | 1.40 | 3.43 | 2.79 |
SRV_02874_a_at | BRAIN ABUNDANT, MEMBRANE ATTACHED SIGNAL PROTEIN 1 | 1.33 | 2.80 | 2.31 |
SRV_04226_a_at | GTPASE, IMAP FAMILY MEMBER 5 | 1.13 | 2.05 | 2.02 |
transport | Â | Â | Â | Â |
SRV_00744_a_at | ADIPOSE DIFFERENTIATION-RELATED PROTEIN | 3.49 | 12.49 | 7.34 |
SRV_00294_s_at | PROTECTIVE PROTEIN FOR BETA-GALACTOSIDASE (GALACTOSIALIDOSIS) | 1.53 | 5.23 | 4.73 |
SRV_02592_a_at | LYSYL OXIDASE-LIKE 1 | 1.18 | 2.81 | 4.59 |
SRV_03991_a_at | SOLUTE CARRIER FAMILY 15, MEMBER 3 | 1.36 | 5.33 | 3.88 |
SRV_03562_at | ERO1-LIKE (S. CEREVISIAE) | 1.00 | 2.24 | 1.77 |
SRV_04996_at | SOLUTE CARRIER FAMILY 7 (CATIONIC AMINO ACID TRANSPORTER, Y+ SYSTEM), MEMBER 3 | 1.07 | 1.75 | 2.11 |
SRV_01134_at | ATPASE, H+ TRANSPORTING, LYSOSOMAL 56/58 KDA, V1 SUBUNIT B2 | 1.04 | 2.17 | 1.59 |
SRV_01220_at | CYTOCHROME C OXIDASE SUBUNIT VIB POLYPEPTIDE 1 (UBIQUITOUS) | 1.15 | 4.51 | 4.18 |
SRV_02133_a_at | GOLGI SNAP RECEPTOR COMPLEX MEMBER 2 | 1.05 | 2.24 | 1.88 |
extracellular region | Â | Â | Â | Â |
SRV_02948_a_at | fibulin 1 | 0.93 | 1.65 | 2.24 |
SRV_01275_at | fibulin 1 | 0.81 | 1.54 | 2.10 |
SRV_02965_at | TISSUE FACTOR PATHWAY INHIBITOR 2 | 3.56 | 3.04 | 2.56 |
SRV_03142_at | ELASTIN MICROFIBRIL INTERFACER 1 | 1.11 | 3.37 | 3.73 |
ion binding | Â | Â | Â | Â |
SRV_00713_a_at | TRANSCOBALAMIN I (VITAMIN B12 BINDING PROTEIN, R BINDER FAMILY) | 2.55 | 23.02 | 12.98 |
SRV_02456_at | GASTRIC INTRINSIC FACTOR (VITAMIN B SYNTHESIS) | 3.36 | 20.67 | 11.63 |
SRV_07722_at | CHROMOSOME 17 OPEN READING FRAME 27 | 0.94 | 4.46 | 4.63 |
SRV_05460_at | tripartite motif-containing 39 | 1.58 | 3.81 | 4.07 |
SRV_05065_at | tripartite motif-containing 17 | 1.53 | 2.86 | 3.46 |
SRV_00371_a_at | FRUCTOSE-1,6-BISPHOSPHATASE 1 | 2.40 | 5.01 | 3.14 |
SRV_00741_a_at | ADENOSINE DEAMINASE, RNA-SPECIFIC | 1.44 | 3.76 | 2.86 |
SRV_00562_a_at | PROSTAGLANDIN-ENDOPEROXIDE SYNTHASE 1 (PROSTAGLANDIN G/H SYNTHASE AND CYCLOOXYGENASE) | 1.29 | 2.05 | 2.54 |
SRV_05448_at | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 | 0.87 | 2.16 | 2.13 |
SRV_02724_at | METHIONINE ADENOSYLTRANSFERASE II, ALPHA | 1.66 | 2.06 | 1.56 |
SRV_00449_a_at | LATENT TRANSFORMING GROWTH FACTOR BETA BINDING PROTEIN 1 | 1.05 | 1.79 | 3.15 |
SRV_00131_a_at | SECRETED PROTEIN, ACIDIC, CYSTEINE-RICH (OSTEONECTIN) | 1.19 | 1.99 | 2.74 |
SRV_04896_a_at | TRANSKETOLASE (WERNICKE-KORSAKOFF SYNDROME) | 1.44 | 4.02 | 2.52 |
SRV_02047_at | ANNEXIN A2 | 1.29 | 2.15 | 2.45 |
SRV_01345_at | INOSITOL 1,4,5-TRIPHOSPHATE RECEPTOR, TYPE 3 | 1.19 | 2.80 | 2.35 |
SRV_12418_at | MYOSIN, LIGHT POLYPEPTIDE 9, REGULATORY | 1.01 | 1.99 | 2.20 |
SRV_01649_at | RETICULOCALBIN 1, EF-HAND CALCIUM BINDING DOMAIN | 1.16 | 3.01 | 2.68 |
Protein binding/transport | Â | Â | Â | Â |
SRV_03206_at | V-SET AND IMMUNOGLOBULIN DOMAIN CONTAINING 4 | 1.90 | 13.14 | 9.17 |
SRV_00797_a_at | SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) | 1.77 | 4.67 | 4.79 |
SRV_04964_a_at | TUBULIN, BETA 6 | 1.06 | 2.53 | 2.55 |
SRV_03477_a_at | TRANSMEMBRANE PROTEIN 4 | 1.59 | 2.22 | 2.39 |
SRV_02085_at | FK506 BINDING PROTEIN 1B, 12.6 KDA | 1.29 | 1.71 | 2.18 |
SRV_02652_a_at | PROTEIN DISULFIDE ISOMERASE FAMILY A, MEMBER 6 | 1.28 | 2.16 | 1.99 |
SRV_02814_at | DNAJ (HSP40) HOMOLOG, SUBFAMILY B, MEMBER 1 | 2.35 | 4.29 | 1.73 |
SRV_03255_a_at | AHA1, ACTIVATOR OF HEAT SHOCK 90 KDA PROTEIN ATPASE HOMOLOG 1 (YEAST) | 1.07 | 2.14 | 1.53 |
SRV_05534_at | HYPOTHETICAL PROTEIN MGC16212 | 1.74 | 4.05 | 3.73 |
SRV_00840_a_at | COLD INDUCIBLE RNA BINDING PROTEIN | 1.03 | 2.46 | 3.20 |
SRV_01147_a_at | BIGLYCAN | 0.99 | 2.01 | 2.90 |
SRV_05461_x_at | tripartite motif-containing 39 | 1.32 | 2.53 | 2.76 |
SRV_02070_a_at | CYSTEINE AND GLYCINE-RICH PROTEIN 1 | 1.27 | 2.22 | 2.46 |
SRV_00257_at | KERATIN 18 | 1.12 | 1.93 | 2.44 |
SRV_04005_at | KDEL (LYS-ASP-GLU-LEU) ENDOPLASMIC RETICULUM PROTEIN RETENTION RECEPTOR 3 | 0.90 | 2.07 | 2.06 |
SRV_02647_a_at | ARP2 ACTIN-RELATED PROTEIN 2 HOMOLOG (YEAST) | 1.23 | 2.33 | 1.93 |
SRV_01234_a_at | CATENIN (CADHERIN-ASSOCIATED PROTEIN), ALPHA 1, 102 KDA | 0.98 | 1.43 | 2.05 |
SRV_01504_a_at | PHOSPHOGLUCONATE DEHYDROGENASE | 1.19 | 2.20 | 1.50 |
SRV_05174_a_at | THREE PRIME REPAIR EXONUCLEASE 2 | 1.57 | 5.55 | 5.02 |
protein modification | Â | Â | Â | Â |
SRV_04305_a_at | GLYCINE N-METHYLTRANSFERASE | 1.24 | 1.84 | 3.49 |
SRV_01832_a_at | UBIQUITIN-CONJUGATING ENZYME E2L 3 | 1.04 | 2.09 | 1.99 |
SRV_00309_at | TRANSGLUTAMINASE 1 (K POLYPEPTIDE EPIDERMAL TYPE I, PROTEIN-GLUTAMINE-GAMMA-GLUTAMYLTRANSFERASE) | 3.22 | 16.60 | 14.36 |
SRV_02093_a_at | HEAT SHOCK 70 KDA PROTEIN 9B (MORTALIN-2) | 1.35 | 3.91 | 2.79 |
SRV_02989_at | HEAT SHOCK 70 KDA PROTEIN 8 | 2.28 | 6.93 | 2.73 |
SRV_01225_at | CRYSTALLIN, ALPHA B | 1.27 | 3.35 | 2.38 |
SRV_05456_a_at | UBIQUITIN SPECIFIC PEPTIDASE 2 | 1.27 | 2.56 | 2.00 |
SRV_05457_a_at | UBIQUITIN SPECIFIC PEPTIDASE 2 | 1.26 | 2.28 | 1.89 |
SRV_11417_a_at | MATRIX METALLOPEPTIDASE 1 (INTERSTITIAL COLLAGENASE) | 5.26 | 13.96 | 3.65 |
SRV_04306_at | GLYCINE N-METHYLTRANSFERASE | 1.03 | 2.15 | 4.66 |
SRV_00327_a_at | CATHEPSIN K (PYCNODYSOSTOSIS) | 1.37 | 3.23 | 3.94 |
cellular process | Â | Â | Â | Â |
SRV_11663_a_at | TIMP METALLOPEPTIDASE INHIBITOR 1 | 1.96 | 24.74 | 23.31 |
SRV_04387_at | RETINOIC ACID RECEPTOR RESPONDER (TAZAROTENE INDUCED) 1 | 1.64 | 6.63 | 9.22 |
SRV_03285_at | RELATED RAS VIRAL (R-RAS) ONCOGENE HOMOLOG 2 | 1.76 | 5.07 | 4.97 |
SRV_04911_at | SIMILAR TO THIOREDOXIN DOMAIN-CONTAINING 2 | 1.34 | 3.15 | 3.20 |
SRV_01534_at | PROTEIN PHOSPHATASE 1, CATALYTIC SUBUNIT, ALPHA ISOFORM | 1.15 | 2.04 | 2.18 |
SRV_04858_at | POLY (ADP-RIBOSE) POLYMERASE FAMILY, MEMBER 9 | 0.97 | 2.36 | 2.15 |
SRV_03421_a_at | LR8 PROTEIN | 1.31 | 1.95 | 2.02 |
SRV_11406_at | V-YES-1 YAMAGUCHI SARCOMA VIRAL RELATED ONCOGENE HOMOLOG | 1.37 | 2.46 | 2.12 |
other | Â | Â | Â | Â |
SRV_03887_at | DYNEIN, CYTOPLASMIC 1, LIGHT INTERMEDIATE CHAIN 1 | 1.31 | 2.42 | 2.20 |
SRV_01920_at | poly (ADP-ribose) glycohydrolase | 1.31 | 1.95 | 2.23 |
SRV_00155_a_at | COAGULATION FACTOR XIII, A1 POLYPEPTIDE | 1.20 | 2.46 | 2.35 |
SRV_01367_a_at | KERATIN 8 | 1.19 | 2.90 | 3.29 |
SRV_00775_at | ARGINASE, TYPE II | 1.44 | 4.08 | 6.06 |
SRV_11767_a_at | INTERFERON INDUCED TRANSMEMBRANE PROTEIN 5 | 1.17 | 2.74 | 4.24 |
SRV_07726_a_at | MACROPHAGE EXPRESSED GENE 1 | 1.69 | 4.25 | 3.18 |
SRV_01302_at | GUANYLATE BINDING PROTEIN 4 | 1.07 | 2.39 | 2.64 |
SRV_02761_at | ARGININE-RICH, MUTATED IN EARLY STAGE TUMORS | 1.10 | 2.17 | 1.99 |
SRV_03758_a_at | ARRESTIN DOMAIN CONTAINING 2 | 0.90 | 5.48 | 8.72 |