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Table 1 Detection of differential expression by analysis

From: Meta-analysis of genome-wide expression patterns associated with behavioral maturation in honey bees

 

Individual Analyses1

Meta-Analyses

 

AC

AD

AF

AM

LL

LM

ML

MM

Study

Sample

AC

1522

93

55

60

15

21

21

26

6

123

AD

4.3%4

65

9

12

5

5

8

6

3

42

AF

38.5%

13.8%

143

53

19

24

12

18

9

99

AM

39.5%

18.5%

37.1%

310

20

35

37

38

6

168

LL

9.9%

7.7%

13.3%

6.5%

422

86

76

78

7

111

LM

13.8%

7.7%

16.8%

11.3%

22.8%

377

73

80

7

114

ML

13.8%

12.3%

8.4%

11.9%

18.0%

19.4%

540

57

6

126

MM

17.1%

9.2%

12.6%

12.3%

18.9%

21.2%

13.8%

413

8

117

Study

18.8%

9.4%

28.1%

18.8%

21.9%

21.9%

18.8%

25.0%

32

22

Sample

80.9%

64.6%

69.2%

54.2%

26.3%

30.2%

23.3%

28.1%

68.8%

853

  1. 1AC: Apis cerana bees raised on an Apis cerana colony; AD: Apis dorsata bees raised on an Apis dorsata colony; AF: Apis florea bees raised on an Apis florea colony; AM: Apis mellifera bees raised on an Apis mellifera colony, LL: Apis mellifera ligustica bees raised on an Apis mellifera ligustica colony; LM: Apis mellifera ligustica bees raised on an Apis mellifera mellifera colony; ML: Apis mellifera mellifera bees raised on an Apis mellifera ligustica colony; MM: Apis mellifera mellifera bees raised on an Apis mellifera mellifera colony.
  2. 2Number of transcripts with differential expression (P-value < 1 × 10-3) within individual analyses, study-level standardized (Study), and sample-level (Sample) meta-analysis (diagonals).
  3. 3Upper off-diagonals are the number of transcripts identified differentially expressed in all pairs of analyses relative to the maximum number of significant transcripts that can overlap in both analyses.
  4. 4Lower off-diagonals are the percentage of transcripts identified differentially expressed in all pairs of analyses relative to the maximum number of significant transcripts that can overlap in both analyses.