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Table 2 Illumina 317 K SNPs using CEU HapMap Samples

From: Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

  Illumina 317,000 SNP Panel (CEU)
Chromosome Total number of SNPs Total number of blocks Total number Interblock SNPS Total number of blocks + Interblock SNPs
1 23055 4959 1336 6295
2 25103 5258 1348 6606
3 21332 4505 1268 5773
4 18923 3979 1055 5034
5 19062 3966 979 4945
6 20524 4044 950 4994
7 16493 3472 977 4449
8 18053 3658 940 4598
9 15691 3305 936 4241
10 15423 3263 899 4162
11 14498 3037 827 3864
12 14844 3097 918 4015
13 11411 2373 620 2993
14 9767 2086 592 2678
15 8817 1942 631 2573
16 8924 2078 705 2783
17 8279 1859 603 2462
18 10390 2183 678 2861
19 5833 1408 545 1953
20 7758 1736 496 2232
21 5430 1130 318 1448
22 5398 1156 379 1535
Total 305,008 64,494 18,000 82,494