Skip to main content

Advertisement

Table 4 HapMap SNPs using CEU HapMap Samples

From: Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

  CEPH Utah HapMap Samples
Chromosome Total number of SNPs Total number of blocks Total number Interblock SNPS Total number of blocks + Interblock SNPs
1 184403 10740 1815 12555
2 211913 11219 1510 12729
3 166801 9431 1426 10857
4 155953 10204 1745 10363
5 161666 8725 1238 9963
6 174458 8677 1743 10420
7 137148 8050 1140 9190
8 141925 7707 1076 8783
9 116824 7092 1105 8197
10 132087 7428 1250 8607
11 124354 6821 1037 7858
12 118973 6959 991 7950
13 99669 5290 793 6083
14 80500 4690 893 5583
15 69104 4690 814 5504
16 68205 5212 817 6029
17 56026 4127 715 4842
18 73392 4486 742 5228
19 35412 3109 570 3679
20 60421 3896 606 4502
21 32740 2141 380 2521
22 33369 2491 421 2853
Total 2,435,343 143,185 22,827 164,296