Table 1 Identification of over- and under-represented gene ontology (GO) terms in differentially-expressed gene set.

response to jasmonic acid stimulus

46

12

1.83

6.63

1.45E-07

3.93E-06

unidimensional cell growth

15

7

0.60

11.86

6.96E-07

1.88E-05

Transport

317

32

12.61

2.57

1.19E-06

3.23E-05

signal transduction

91

9

3.62

2.51

0.01

0.26

response to oxidative stress

61

7

2.43

2.92

0.01

0.27

biological process unknown

5116

231

203.57

1.15

0.01

0.27

Metabolism

507

31

20.17

1.55

0.01

0.29

circadian rhythm

15

3

0.60

5.08

0.02

0.52

Growth

8

2

0.32

6.35

0.04

1

extracellular matrix organization and biogenesis

1

1

0.04

25.42

0.04

1

cell death

9

2

0.36

5.65

0.05

1

response to hormone stimulus

2

1

0.08

12.71

0.08

1

response to temperature stimulus

2

1

0.08

12.71

0.08

1

response to stress

43

4

1.71

2.36

0.09

1

response to cold

3

1

0.12

8.47

0.11

1

response to wounding

18

2

0.72

2.82

0.16

1

Aging

20

2

0.80

2.54

0.18

1

response to auxin stimulus

22

2

0.88

2.31

0.21

1

gibberellic acid mediated signaling

10

1

0.40

2.54

0.33

1

sugar mediated signaling

12

1

0.48

2.12

0.38

1

Biosynthesis

105

5

4.18

1.21

0.40

1

defense response

158

7

6.29

1.13

0.43

1

response to water deprivation

15

1

0.60

1.69

0.45

1

embryonic development (sensu Magnoliophyta)

23

1

0.92

1.11

0.60

1

response to heat

30

1

1.19

-1.18

0.70

1

photosynthesis

37

1

1.47

-1.46

0.77

1

Undetermined

18420

631

732.96

-1.15

1

1