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Table 1 Sequence and assembly statistics

From: Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches

  Pyrosequencing ESTs Sanger ESTs Pyrosequencing + Sanger ESTs Pyrosequencing assembly Sanger assembly Hybrid Assembly
No. sequences 90,664 9,578 90,664 + 9,578 = 100,242 35,507 (11,155 assemblies) 4,689 (1,584 assemblies) 34,495 (10,811 assemblies)
Total bases (bp) 17,315,041 4,811,851 22,126,892 8,274,073 2,796,219 9,552,701
Minimum length (bp) 100 100 100 100 100 100
Average length (bp) 190 502 220 233 596 276
Maximum length (bp) 425 1,002 1,002 1,385 4,283 4,471
%GC 50.3 51.1 50.5 51.3 53.3 51.7
%N 0.04 0 0.03 0.05 0 0.04