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Table 1 Summary of clinical, genomic and RNA data for analysed patients

From: A novel custom high density-comparative genomic hybridization array detects common rearrangements as well as deep intronic mutations in dystrophinopathies

Sample

Clinical phenotype

MLPA results

Array results

Array breakpoints

Size of breakpoint

RNA results

Controls

      

Pt 1

DMD

dup ex2

dup (intron 1P_intron 2)+ dup intron 2

chrX:g.(32,882,565_32,885,186)_(32,922,352_32,923,179)dup+ (32,936,752_32,938,681)_(33,055,162_33,055,546)dup

37,166 + 116,481

r.(ex2)dup

Pt 2

BMD

del ex14

del (intron 13_ex14)

chrX:g.(32,501,829_32,502,002)_(32,505,571_32,505,939)del

3,569

Not available

Pt 3

BMD

dup ex3_6

dup (intron 2_ex6)

chrX:g.(32,744,336_32,744,610)_(32,855,933_32,856,897)dup

111,323

r.(ex3_5)dup

Pt 4

DMD plus MR

dup ex65_79

dup (intron 64_*241)

chrX:g.(31,049,450_31,049,716)_(31,138,870_31,139,129)dup

89,154

Not available

Patients

      

Pt 5

DMD

NEG

dup intron 55

chrX:g.(31,437,578_31,437,692)_(31,441,662_31,442,049)dup

3,970

Not available

Pt 6

DMD

NEG

del intron 44 + del intron 45

chrX:g.(31,890,926_31,891,072)_(31,894,874_31,894,891)del+ (31,950,161_31,950,611)_(32,048,920_32,049,217)del

3,802 + 98,309

r.(ex45)del

Pt 7

DMD

NEG

dup intron 4

chrX:g.(32,762,962_32,763,096)_(32,764,472_32,764,484)dup

1,376

r.0(ex4_5)

Pt 8

DMD

NEG

NEG

-

-

r.9563+1215A>G ins9563+1068_9563+9563+1214

Pt 9

DMD

NEG

NEG

-

-

r.(5325+1740_5325+1757)del ins5325+1779_5325+1839

Pt 10

DMD

NEG

NEG

-

-

r.8217+18052A>G ins8217+18053_8217+18102

Pt 11

DMD

NEG

NEG

-

-

-

Pt 12

DMD

NEG

NEG

-

-

-

  1. DMD: Duchenne Muscular Dystrophy
  2. BMD: Becker Muscular Dystrophy
  3. MR: Mental Retardation
  4. NEG: Negative
  5. Pt: Patient