A cross-species transcriptomics approach to identify genes involved in leaf development

BMC Genomics

Table 2 The most highly connected gene within transcription modules

Module	Gene model	Protein ID	Linkage Group	Start bp	Closest ATG	Annotation
green	estExt_fgenesh4_kg.C_LG_X0057	814174	X	16689588	At5g46020	similar to cupin family protein
blue	estExt_fgenesh4_pm.C_LG_V0721	831725	V	17784177	At1g76540	cyclin dependent kinase B2:1
red	estExt_fgenesh4_pg.C_LG_XII1021	823432	XII	11985750	At4g25050	acyl carrier protein 4 (ACP4)
turquoise	estExt_fgenesh4_pg.C_440087	826955	scaffold 44	1069077	At1g55150	DEAD box RNA helicase (RH20)
orange	estExt_fgenesh4_pg.C_1580005	828416	scaffold 158	67532	At5g07990	Transparent Testa 7 (TT7), required for flavonoid 3' hydroxylase activity
grey	estExt_fgenesh4_pg.C_LG_X1117	822127	X	12350943	At1g09740	ethylene-responsive protein, similar to Universal Stress Protein (USP)

The most highly connected gene within each transcription modules identified using average linkage hierarchical clustering. Module colours refer to Figure 4.

ISSN: 1471-2164