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Table 2 Summary of lipid-related probes differently expressed in seeds of DGAT transgenic plants.

From: Transgenic increases in seed oil content are associated with the differential expression of novel Brassica-specific transcripts

GO cellular process

GenBank accession #

Top hit in Arabidopsis

Description

Lipid accumulation/Storage (6)

CN733866

At3g27660

Oleosin4

 

EE404224

At3g27660

Oleosin4

 

CN734396

At3g27660

Oleosin4

 

CN733358

At5g40420

Oleosin2

 

CN725729

At5g51210

Oleosin3

 

EE404495

At5g40420

Oleosin2

Lipid transport/lipid binding (7)

DY013108

At2g38540

LTP1 similar to LP1 (nonspecific lipid transfer protein 1)

 

EE548798

At2g38540

LTP1 similar to LP1 (nonspecific lipid transfer protein 1)

 

DY009497

At5g55410

Protease inhibitor/seed storage/lipid transfer protein family protein

 

DY004194

At3g22600

Protease inhibitor/seed storage/lipid transfer protein family protein

 

CN727063

At5g55450

Protease inhibitor/seed storage/lipid transfer protein family protein

 

EE541123

At4g30880

Protease inhibitor/seed storage/lipid transfer protein family protein

 

CN729334

At5g59310

Encodes a member of the lipid transfer protein family

Fatty acid biosynthesis (7)

EE439753

At2g47240

Long-chain acyl-CoA synthetase

 

DY003951

At5g47635

Unknown protein

 

CX269616

At5g35360

Biotin carboxylase subunit (CAC2)

 

CX270177

At5g35360

Biotin carboxylase subunit (CAC2)

 

CX268549

At3g05420

Acyl-CoA binding protein

 

CX266957

At2g38040

Acetyl-CoA carboxylase

 

DY010115

At5g49460

B subunit of ATP Citrate lyase

Lipid Metabolism (5)

DY009539

At1g34430

E2 subunit of Pyruvate dehydrogenase complex (PDC)

 

DY004112

At2g43710

Stearoyl-ACP desaturase

 

CN736133

At1g59900

E1 subunit of PDC

 

EE543730

At1g06080

delta 9 acyl-lipid desaturases

 

CX278600

At4g29720

Polyamine oxidase

Cuticlebiosynt hesis (2)

DY009608

At1g67730

Ketoreductase/oxidoreductase

 

DY013393

At2g26250

3-ketoacyl-CoA synthase

Miscellaneous (8)

ES264646

At3g18000

N-methyltransferase-like protein

 

CN728393

At3g18000

N-methyltransferase-like protein

 

CN734808

At4g16155

Lipoamide dehydrogenase 2

 

EE435778

At1g54100

Aldehyde dehydrogenase

 

EE462569

At4g17480

Palmitoyl thioesterase

 

EE550782

At1g73600

Phosphoethanolamine N-methyltransferase

 

CN733236

At4g26740

Arabidopsis Seed Gene1 (ATS1)

 

CN726535

At4g26740

Arabidopsis Seed Gene1 (ATS1)

Glycolipid biosynthesis (1)

EE550786

At4g00550

UDP-galactose-dependent digalactosyldiacylglycerol synthase

  1. Functional categorization based on closest hit on Arabidopsis chromosome, and the annotation of corresponding genes.