Skip to main content

Table 2 Summary of lipid-related probes differently expressed in seeds of DGAT transgenic plants.

From: Transgenic increases in seed oil content are associated with the differential expression of novel Brassica-specific transcripts

GO cellular process GenBank accession # Top hit in Arabidopsis Description
Lipid accumulation/Storage (6) CN733866 At3g27660 Oleosin4
  EE404224 At3g27660 Oleosin4
  CN734396 At3g27660 Oleosin4
  CN733358 At5g40420 Oleosin2
  CN725729 At5g51210 Oleosin3
  EE404495 At5g40420 Oleosin2
Lipid transport/lipid binding (7) DY013108 At2g38540 LTP1 similar to LP1 (nonspecific lipid transfer protein 1)
  EE548798 At2g38540 LTP1 similar to LP1 (nonspecific lipid transfer protein 1)
  DY009497 At5g55410 Protease inhibitor/seed storage/lipid transfer protein family protein
  DY004194 At3g22600 Protease inhibitor/seed storage/lipid transfer protein family protein
  CN727063 At5g55450 Protease inhibitor/seed storage/lipid transfer protein family protein
  EE541123 At4g30880 Protease inhibitor/seed storage/lipid transfer protein family protein
  CN729334 At5g59310 Encodes a member of the lipid transfer protein family
Fatty acid biosynthesis (7) EE439753 At2g47240 Long-chain acyl-CoA synthetase
  DY003951 At5g47635 Unknown protein
  CX269616 At5g35360 Biotin carboxylase subunit (CAC2)
  CX270177 At5g35360 Biotin carboxylase subunit (CAC2)
  CX268549 At3g05420 Acyl-CoA binding protein
  CX266957 At2g38040 Acetyl-CoA carboxylase
  DY010115 At5g49460 B subunit of ATP Citrate lyase
Lipid Metabolism (5) DY009539 At1g34430 E2 subunit of Pyruvate dehydrogenase complex (PDC)
  DY004112 At2g43710 Stearoyl-ACP desaturase
  CN736133 At1g59900 E1 subunit of PDC
  EE543730 At1g06080 delta 9 acyl-lipid desaturases
  CX278600 At4g29720 Polyamine oxidase
Cuticlebiosynt hesis (2) DY009608 At1g67730 Ketoreductase/oxidoreductase
  DY013393 At2g26250 3-ketoacyl-CoA synthase
Miscellaneous (8) ES264646 At3g18000 N-methyltransferase-like protein
  CN728393 At3g18000 N-methyltransferase-like protein
  CN734808 At4g16155 Lipoamide dehydrogenase 2
  EE435778 At1g54100 Aldehyde dehydrogenase
  EE462569 At4g17480 Palmitoyl thioesterase
  EE550782 At1g73600 Phosphoethanolamine N-methyltransferase
  CN733236 At4g26740 Arabidopsis Seed Gene1 (ATS1)
  CN726535 At4g26740 Arabidopsis Seed Gene1 (ATS1)
Glycolipid biosynthesis (1) EE550786 At4g00550 UDP-galactose-dependent digalactosyldiacylglycerol synthase
  1. Functional categorization based on closest hit on Arabidopsis chromosome, and the annotation of corresponding genes.