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Table 3 A detailed manual analysis

From: The RAST Server: Rapid Annotations using Subsystems Technology

   missing in RAST missing in SEED
Genome RNAs hypoth. non-hypo hypoth. non-hypo
Alcanivorax borkumensis SK2 51 113 38 49 16
Methanocaldococcus jannaschii DSM 2661 43 105 25 74 19
Wolinella succinogenes DSM 1740 45 40 44 98 22
  1. A detailed manual analysis of the genes called in RAST and in the SEED sheds some light on the differences in the respective predictions. As the matching was performed on protein sequences, RNAs could not be matched. Genes found in the SEED and not predicted in the RAST were split into two categories with and without hypothetical annotations. Additional predictions found in RAST but not in SEED were also included and again split into hypothetical and non-hypothetical.