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Table 1 Percentagea of nucleotide sequence identity in pairwise alignments of genomic regions including TRG V8-1, V2-1, V9-1, V1, V5-1 and V5-2 genes

From: Genomic organization and recombinational unit duplication-driven evolution of ovine and bovine T cell receptor gamma loci

 

V8-1

V2-1

V9-1

V1

V5-1

V5-2

V8-1

-

3206 bp

4036 bp

2151 bp

2319 bp

2376 bp

  

78.4%

78.3%

77.4%

77.0%

77.0%

V2-1

 

-

5227 bp

2825 bp

3627 bp

4833 bp

   

78.0%

78.0%

77.0%

77.9%

V9-1

  

-

2184 bp

3016 bp

3063 bp

    

78.8%

76.8%

76.8%

V1

   

-

2580 bp

2796 bp

     

79.8%

79.4%

V5-1

     

4863 bp

     

-

97.9%

V5-2

     

-

  1. aThe percentages have been calculated as weighted average of identity values obtained by blastz algorithm (PipMaker) on the conserved regions.